PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022153715.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | MYB | ||||||||
Protein Properties | Length: 183aa MW: 20808.5 Da PI: 10.8991 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.3 | 7.4e-18 | 17 | 62 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ede+l ++v+q+G ++W++Ia++++ gR++k+c++rw++ XP_022153715.1 17 RGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQ-GRSGKSCRLRWFNQ 62 899*****************************.***********996 PP | |||||||
2 | Myb_DNA-binding | 59.4 | 8.1e-19 | 69 | 112 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++++eE+e+l a++ +G++ W++Iar ++ gRt++ +k++w+ XP_022153715.1 69 RRPFSEEEEERLMAAHRIHGNK-WALIARLLP-GRTDNAVKNHWHV 112 679*******************.*********.***********85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 183 aa Download sequence |
MDAAASTPGD DGKSSPRGHW RPAEDEKLQR LVQQFGARNW NSIAEKLQGR SGKSCRLRWF 60 NQLDPRINRR PFSEEEEERL MAAHRIHGNK WALIARLLPG RTDNAVKNHW HVIIARKHRQ 120 HFKIHGGGRF PYGPTTAGVF FRQKSAIILN ADIKRDEESA DPKDIVPFID FLGVGISSST 180 PNK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G17950.1 | 8e-62 | MYB family protein |