PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022153578.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

CPP

Protein Properties

Length: 591aa MW: 65018.5 Da PI: 5.9446

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022153578.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	48.5	1.7e-15	255	294	2	41
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 ++k+CnCkks Clk+YCeCf+ag++C+++C C+dC Nk e XP_022153578.1 255 NEKRCNCKKSGCLKLYCECFSAGVYCGNSCGCKDCINKIE 294 679**********************************965 PP
2	TCR	47.4	3.9e-15	342	381	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++kkgC+Ckks C k+YCeCf+a++ C++ C Ce+C+N+ XP_022153578.1 342 RHKKGCKCKKSMCHKRYCECFQAEVGCTSACLCENCRNTF 381 589***********************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 591 aa Download sequence
MAYLVSLYKI SILVSVSLVS VHTQISLSNM NSSPPPASGP SSSAVQDSSY LDFCNSLRPI 60 ETLLLEPESN GNQSREGEDM ETESSFVERG RIGIPNVDCE NNTHSSDPHK EDRIEKMPSL 120 EDCEEISDKN EACNKVKGEK TVEALLLEGN KTVEALLSDK TVSTEEVKLE LTEVIHPSHK 180 SSECLENAAG VEYQISDISK LNPEENLRAA SSEKLSGEFD KMSPFERGDM IELINKVKPT 240 GRKRKKSEHM GENKNEKRCN CKKSGCLKLY CECFSAGVYC GNSCGCKDCI NKIEYEDKVK 300 SVSRQIQSKN AFAFAPKVTR QSLDFPTRVM VEENCTTSSL HRHKKGCKCK KSMCHKRYCE 360 CFQAEVGCTS ACLCENCRNT FGTRTDLDQN TGDERTDAAA EAEAQDYTQL ANNFSSTYAS 420 NFSGAAPTSN LTNNPNGCPE SPFGSFSSTV SDPLSWRSPQ SSVEIANNMD CSYGPTSSSN 480 TLLFEMMARN NGNGCHDQAL PMAPFSASNI GSLRFASFAA ARLMVPPMNQ LFGSMSYVRQ 540 GLNVNPQSNL RGSQQFVRQI IPTFASHFTR MNYNNGSSHN GSDHNNFNSG Q

Sequence ? help Back to Top

Protein Sequence Length: 591 aa Download sequence

MAYLVSLYKI SILVSVSLVS VHTQISLSNM NSSPPPASGP SSSAVQDSSY LDFCNSLRPI  60
ETLLLEPESN GNQSREGEDM ETESSFVERG RIGIPNVDCE NNTHSSDPHK EDRIEKMPSL  120
EDCEEISDKN EACNKVKGEK TVEALLLEGN KTVEALLSDK TVSTEEVKLE LTEVIHPSHK  180
SSECLENAAG VEYQISDISK LNPEENLRAA SSEKLSGEFD KMSPFERGDM IELINKVKPT  240
GRKRKKSEHM GENKNEKRCN CKKSGCLKLY CECFSAGVYC GNSCGCKDCI NKIEYEDKVK  300
SVSRQIQSKN AFAFAPKVTR QSLDFPTRVM VEENCTTSSL HRHKKGCKCK KSMCHKRYCE  360
CFQAEVGCTS ACLCENCRNT FGTRTDLDQN TGDERTDAAA EAEAQDYTQL ANNFSSTYAS  420
NFSGAAPTSN LTNNPNGCPE SPFGSFSSTV SDPLSWRSPQ SSVEIANNMD CSYGPTSSSN  480
TLLFEMMARN NGNGCHDQAL PMAPFSASNI GSLRFASFAA ARLMVPPMNQ LFGSMSYVRQ  540
GLNVNPQSNL RGSQQFVRQI IPTFASHFTR MNYNNGSSHN GSDHNNFNSG Q

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	242	246	RKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22780.1	5e-35	CPP family protein