PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022153555.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family GATA
Protein Properties Length: 347aa    MW: 38023.3 Da    PI: 6.72
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022153555.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA534.6e-17248282135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C +C + kTp+WR gp g+ktLCnaCG++y++ +l
  XP_022153555.1 248 CLHCAAEKTPQWRTGPMGPKTLCNACGVRYKSGRL 282
                     99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    
MPQTFRICTY APPLPSQKPH STPTLLPHPR SPVTQITLNY VYSTSMEVPE YLDGGYYGTG  60
AGQFSPEMQK SAADHFAVDE YLLDFSNEDV AMTSGFFDNV AGNSSDSSTV TAVESCNSSV  120
SGGDNRLSGN FGSGSLCEAQ FSSELCIPCD DLAELEWLSN FVEDSFSTEE IDKNLHAVRF  180
PPTTSSSVHG SAKTTSFFQD EALALPGKAR SKRSRASPCD WSTRLLHMAA PAKTKGESSN  240
AETSCRKCLH CAAEKTPQWR TGPMGPKTLC NACGVRYKSG RLVPEYRPAA SPTFVSTKHS  300
NSHRKVMELR RQKEEQFLSE SSIFGRSNGC NEFLIHRRNG GDFSHMM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.16e-74GATA family protein