PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022153189.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MYB
Protein Properties Length: 311aa    MW: 35429.8 Da    PI: 5.33
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022153189.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding39.21.7e-121358146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                     +g+W  eEde l++ vk++G+++W++I ++  + Rt+k+c++rw +
   XP_022153189.1 13 KGPWKLEEDEVLLNHVKRFGPRDWSSIRSKGLLQRTGKSCRLRWVN 58
                     79*************************8887799**********87 PP
2Myb_DNA-binding43.76.1e-1469108344
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 
                      ++T+eE+   +++ +++G++ W++Ia +++ gRt++++k++w
   XP_022153189.1  69 KFTAEEERVVIELQARFGNK-WAKIATYLP-GRTDNDVKNFW 108
                      79******************.*********.*********** PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MEERVSEEEV IRKGPWKLEE DEVLLNHVKR FGPRDWSSIR SKGLLQRTGK SCRLRWVNKL  60
RPNLKNGCKF TAEEERVVIE LQARFGNKWA KIATYLPGRT DNDVKNFWSS RQKRLARLLQ  120
SSTTPSKLQR STKKEKPVDS NAPSMEVQKL SSASEGESSS RPMSCSSSCC AENAAPVNIF  180
CPWPDPYSSK FLGFGTNFLQ PEFTPFQTIK SEPQTEFSST LHTQPLDDDS TFLSQRLHGP  240
GFFDDFLEPL DVSPLENEVQ FPLGQPFFEP IGCCPSHDVE REKVDNPESF FSEFPADIFD  300
RIEPLPSSPE N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60460.13e-80MYB family protein