PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022153076.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | YABBY | ||||||||
Protein Properties | Length: 169aa MW: 18880.4 Da PI: 9.4479 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 237.7 | 2.6e-73 | 6 | 160 | 5 | 170 |
YABBY 5 ssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsse 99 +se+vCyv+CnfCntilavsvP +s+f++vtvrCGhC++llsvn+ + q+++ ++ + + +++++ +++ +++ s+s++ s+ XP_022153076.1 6 MASERVCYVHCNFCNTILAVSVPCNSMFTLVTVRCGHCSNLLSVNMGASLQVVPPQDSSQ-------QGHKQQQVSSTGDSSKERGSSSSKCSK- 92 689***************************************************999722.......222222222333333333333333333. PP YABBY 100 klsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 + ++ +++ r+pp irPPekrqrvPsaynrfikeeiqrika+nPdishreafs+aaknWahfP+ihfgl XP_022153076.1 93 -I-DSAERDQHRIPP-IRPPEKRQRVPSAYNRFIKEEIQRIKAKNPDISHREAFSTAAKNWAHFPHIHFGL 160 .2.344555566777.9****************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 169 aa Download sequence |
MSLDMMASER VCYVHCNFCN TILAVSVPCN SMFTLVTVRC GHCSNLLSVN MGASLQVVPP 60 QDSSQQGHKQ QQVSSTGDSS KERGSSSSKC SKIDSAERDQ HRIPPIRPPE KRQRVPSAYN 120 RFIKEEIQRI KAKNPDISHR EAFSTAAKNW AHFPHIHFGL KLDGNKQSN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08465.1 | 4e-71 | YABBY family protein |