PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022153050.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

NAC

Protein Properties

Length: 341aa MW: 38620.4 Da PI: 5.3522

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022153050.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	157.8	4.5e-49	17	143	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 + pGfrF+P+deel+ +yLkkk+eg+++++ +vi+e++i+k+ePwdLp+k + +e+ew+fFs+r +ky++g++++rat+ gyWkatgk+++v+s XP_022153050.1 17 MFPGFRFSPKDEELILFYLKKKLEGSDNSV-DVISEIEICKFEPWDLPEKSRIpSENEWFFFSPRGRKYPNGTQNKRATELGYWKATGKERNVKS 110 579**********************999.99***********654444788********************************** PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128 +ge +g+k+tLvf+ grap+ge+t+W+mhey l XP_022153050.1 111 -GGEIIGTKRTLVFHLGRAPTGERTEWIMHEYCL 143 .9****************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 341 aa Download sequence
MGGVSKEAEM SMAALSMFPG FRFSPKDEEL ILFYLKKKLE GSDNSVDVIS EIEICKFEPW 60 DLPEKSRIPS ENEWFFFSPR GRKYPNGTQN KRATELGYWK ATGKERNVKS GGEIIGTKRT 120 LVFHLGRAPT GERTEWIMHE YCLNDKSQDS MVVCRLRKNN DFRRSNTDQK ASSSRRQVSG 180 DGDDQKVGAG AGVESDRFSK NCSSSFDSHS LEQFDSAIES NQKQTSDPAL QESLSRDEDY 240 GGTGEEELYA DLLNDDIVTL DDSLLCKTKT HNPSPVIMNF SQSETYARPR PPTQTAVPEV 300 EALPCQGRRM KVKKQEQIDI GVVIFVVIIF VICLHVISWW W

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	308	314	RRMKVKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27300.1	5e-96	NAC family protein