PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022152930.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family C2H2
Protein Properties Length: 360aa    MW: 40592.2 Da    PI: 9.0798
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022152930.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.79.9e-06204226123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     + C +Cgk  +r  nL+ H+r H
  XP_022152930.1 204 HYCRICGKGLKRDANLRMHMRAH 226
                     68*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    
MIISNFQMLP FPSSQNPLVS SPNHETLHHL DSFGSHSTSL LHNLSIVKEK LHQIRSVVNI  60
VICNHQNSPE SLPALSSPVA TVAINSMVQE LIMTASSMLF TCQQMNNLVV NSSVRNDIIV  120
DDLHRQGLAD NNRSTALFDM ASNHPDHNEW YNNMTTTYNN NNDCYNNSRI EETTTTTTTT  180
IQNHRISADI VELEASDLLA KYTHYCRICG KGLKRDANLR MHMRAHGDEY KASGALSNPE  240
RSQGRDLKVT KMGTKYSCPQ QGCRWNQKHA KFQPLKSLIC VKNHYKRTHC PKMYVCKLCS  300
RKKFSVLSDL RTHEKHCGDV KWLCSCGTTF SRKDKLMGHV ALFVGHAPAI GSSANFRGKF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22890.14e-96C2H2 family protein