PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022152584.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MYB_related
Protein Properties Length: 277aa    MW: 30587.4 Da    PI: 9.6946
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022152584.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.41.7e-13556147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqky 47
                     +++WT eE+e l+ +v+++G+g Wk I +        ++R+  ++k++w+++
   XP_022152584.1  5 KQKWTSEEEEALLAGVAKHGPGKWKNILKDPEfapflTHRSNIDLKDKWRNL 56
                     79************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MGNQKQKWTS EEEEALLAGV AKHGPGKWKN ILKDPEFAPF LTHRSNIDLK DKWRNLSVST  60
ASQGSKEKSR APKAKAIVAA SLSNNQNSVP ARLNASADTA GEEPPNTNAQ DGKNAPRYNA  120
MIFEALSTIK DSNGCDIGTI VNFIEQRHEV PQNFRRLLSS RLRRLVSQGK LEKVQNCYKV  180
RKDNSLAVKT PTPKQKDVRP RIPQYMGGLM PSGETVEDAA RAAAYKVADA ENKSFLAAEA  240
VKEAERVAKM AEDTDSMLQM IXDVYEQCSR GEIILLA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17520.11e-67MYB_related family protein