PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022152281.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

ARR-B

Protein Properties

Length: 603aa MW: 68322.4 Da PI: 6.7002

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022152281.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	36.6	1e-11	247	291	4	53
G2-like 4 lrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkY 53 l W+ e H++F a+++L A Pk il++m+ ++Ltl +v+ HLQ + XP_022152281.1 247 LLWNAERHRKFTYALNKL-----ARPKLILKMMNEPCLTLRQVANHLQVF 291 67**************.....***********************87 PP
2	Response_reg	39.2	3.6e-14	18	124	1	107
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 +l+vd +pl ++ ++++le++ y +v+++++++ al +++ek +Dl++ +mp+md + +l + +++ + +++++ + + a++ G XP_022152281.1 18 ILVVDHDPLSLMQMASLLEQQFY-KVTTTQQASVALSMIEEKGdrFDLVMANASMPDMDKFSFLHALLKKNIAVISVMLSGMN-LDVATKPSAGG 110 89***************9999.***********888888******************7766455555555333.67999999999 PP ESEEEESS--HHHH CS Response_reg 94 akdflsKpfdpeel 107 + fl +p+++++l XP_022152281.1 111 KSYFLQNPISKDDL 124 999****99998 PP

Sequence ? help Back to Top
Protein Sequence Length: 603 aa Download sequence
MGYWVTDYLP RLDKNLNILV VDHDPLSLMQ MASLLEQQFY KVTTTQQASV ALSMIEEKGD 60 RFDLVMANAS MPDMDKFSFL HALLKKNIAV ISVMLSGMNL DVATKPSAGG KSYFLQNPIS 120 KDDLKYVWQH IYHRNINVTK LAQKVNFIEK SKSGGIKIAD TIDLSGSDAN NNSYINYQPT 180 NYKGKERTKQ TEYQDGLVGS NFGGRRSSHD IEGTIKEKRI KFGSQRIDKD HERRNEYYIP 240 SDGRSCLLWN AERHRKFTYA LNKLARPKLI LKMMNEPCLT LRQVANHLQV FFYQKHKAQV 300 ECIKRRRENK LAFKGETSKS NSSARTQLSP LLQKQHHKMR RIRDGSARST CFLGGDKLRP 360 IVPKTQPIPG LPVSNFANCG LGMLNHNFQQ VDSYLNYNSI PFNNNKEVGL YPYNIQTFEK 420 EAGNVLCSDV SEKFALVGEE VQISELNFPN VSTMASEVAC SRIFDEIQLP DNLLDVVDHQ 480 LYLSASEIEN QKAMECSGIS KEIPSPFREI TVPDSNNVAP DFIDWEPELP TTFGNEGSQP 540 LTEYADMILN VLEDDPYNLG SDLSLSDVDK YCEWLRSTVL EDGSSPNNFI CDNAEKVPIG 600 NAQ

Sequence ? help Back to Top

Protein Sequence Length: 603 aa Download sequence

MGYWVTDYLP RLDKNLNILV VDHDPLSLMQ MASLLEQQFY KVTTTQQASV ALSMIEEKGD  60
RFDLVMANAS MPDMDKFSFL HALLKKNIAV ISVMLSGMNL DVATKPSAGG KSYFLQNPIS  120
KDDLKYVWQH IYHRNINVTK LAQKVNFIEK SKSGGIKIAD TIDLSGSDAN NNSYINYQPT  180
NYKGKERTKQ TEYQDGLVGS NFGGRRSSHD IEGTIKEKRI KFGSQRIDKD HERRNEYYIP  240
SDGRSCLLWN AERHRKFTYA LNKLARPKLI LKMMNEPCLT LRQVANHLQV FFYQKHKAQV  300
ECIKRRRENK LAFKGETSKS NSSARTQLSP LLQKQHHKMR RIRDGSARST CFLGGDKLRP  360
IVPKTQPIPG LPVSNFANCG LGMLNHNFQQ VDSYLNYNSI PFNNNKEVGL YPYNIQTFEK  420
EAGNVLCSDV SEKFALVGEE VQISELNFPN VSTMASEVAC SRIFDEIQLP DNLLDVVDHQ  480
LYLSASEIEN QKAMECSGIS KEIPSPFREI TVPDSNNVAP DFIDWEPELP TTFGNEGSQP  540
LTEYADMILN VLEDDPYNLG SDLSLSDVDK YCEWLRSTVL EDGSSPNNFI CDNAEKVPIG  600
NAQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68210.1	3e-32	ARR-B family protein