PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022152280.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

ARR-B

Protein Properties

Length: 605aa MW: 68564.7 Da PI: 6.8318

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022152280.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	41.2	3.6e-13	246	293	4	53
G2-like 4 lrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkY 53 l W+ e H++F a+++LG ++ Pk il++m+ ++Ltl +v+ HLQ + XP_022152280.1 246 LLWNAERHRKFTYALNKLG--DRSRPKLILKMMNEPCLTLRQVANHLQVF 293 67**************5..7899*********************87 PP
2	Response_reg	37.2	1.5e-13	18	123	1	107
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 +l+vd +pl ++ ++++le++ y +v+++++++ al +++ek Dl++ +mp+md + +l + +++ + +i++ + + + a++ G XP_022152280.1 18 ILVVDHDPLSLMQMASLLEQQFY-KVTVTQQASVALSMIQEKGdrSDLVMANASMPDMDKFSFLHALLKKN--IAVIFMLSGMNLDVATKPSAGG 109 89***************9999.***********999889******************8766..999999999999****** PP ESEEEESS--HHHH CS Response_reg 94 akdflsKpfdpeel 107 + fl +p+++++l XP_022152280.1 110 KSYFLQNPISKDDL 123 ********9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 605 aa Download sequence
MGYWVTDYLP RLDKNLNILV VDHDPLSLMQ MASLLEQQFY KVTVTQQASV ALSMIQEKGD 60 RSDLVMANAS MPDMDKFSFL HALLKKNIAV IFMLSGMNLD VATKPSAGGK SYFLQNPISK 120 DDLKYVWQHI YHRNINVTKL AQKVNFIEKS KSGGIKIADT IDLSGSDANN NSYINYQPTN 180 YKGKERTKQT EYQDGLVGSN FGGRRSSHDI EGTIKEKRIK FGSQRIDKDH ERRNEYYIPS 240 DGRSCLLWNA ERHRKFTYAL NKLGDRSRPK LILKMMNEPC LTLRQVANHL QVFFYQKHKA 300 QVECIKRRRE NKLAFKGETS KSNSSARTQL SPLLQKQHHK MRRIRDGSAR STCFLGGDKL 360 RPIVPKTQPI PGLPVSNFAN CGLGMLNHNF QQVDSYLNYN SIPFNNNKEV GLYPYNIQTF 420 EKEAGNVLCS DVSEKFALVG EEVQISELNF PNVSTMASEV ACSRIFDEIQ LPDNLLDVVD 480 HQLYLSASEI ENQKAMECSG ISKEIPSPFR EITVPDSNNV APDFIDWEPE LPTTFGNEGS 540 QPLTEYADMI LNVLEDDPYN LGSDLSLSDV DKYCEWLRST VLEDGSSPNN FICDNAEKVP 600 IGNAQ

Sequence ? help Back to Top

Protein Sequence Length: 605 aa Download sequence

MGYWVTDYLP RLDKNLNILV VDHDPLSLMQ MASLLEQQFY KVTVTQQASV ALSMIQEKGD  60
RSDLVMANAS MPDMDKFSFL HALLKKNIAV IFMLSGMNLD VATKPSAGGK SYFLQNPISK  120
DDLKYVWQHI YHRNINVTKL AQKVNFIEKS KSGGIKIADT IDLSGSDANN NSYINYQPTN  180
YKGKERTKQT EYQDGLVGSN FGGRRSSHDI EGTIKEKRIK FGSQRIDKDH ERRNEYYIPS  240
DGRSCLLWNA ERHRKFTYAL NKLGDRSRPK LILKMMNEPC LTLRQVANHL QVFFYQKHKA  300
QVECIKRRRE NKLAFKGETS KSNSSARTQL SPLLQKQHHK MRRIRDGSAR STCFLGGDKL  360
RPIVPKTQPI PGLPVSNFAN CGLGMLNHNF QQVDSYLNYN SIPFNNNKEV GLYPYNIQTF  420
EKEAGNVLCS DVSEKFALVG EEVQISELNF PNVSTMASEV ACSRIFDEIQ LPDNLLDVVD  480
HQLYLSASEI ENQKAMECSG ISKEIPSPFR EITVPDSNNV APDFIDWEPE LPTTFGNEGS  540
QPLTEYADMI LNVLEDDPYN LGSDLSLSDV DKYCEWLRST VLEDGSSPNN FICDNAEKVP  600
IGNAQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68210.1	1e-32	ARR-B family protein