PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022151198.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family HD-ZIP
Protein Properties Length: 264aa    MW: 30303.5 Da    PI: 4.4768
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022151198.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox56.16.4e-184699356
                    --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                    k++++t +q++ Le+ F+ ++++ +e++ +LA+++gL  rqV vWFqNrRa+ k
  XP_022151198.1 46 KKRRLTVDQVRLLERNFNVENKLEHERKVQLAEEIGLRPRQVAVWFQNRRARSK 99
                    45689***********************************************99 PP
2HD-ZIP_I/II111.94.1e-3646135291
     HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                     kkrrl+ +qv+lLE++F+ e+kLe+erKv+la+e+gl+prqvavWFqnrRAR ktk++E dye+L ++y +lk++ ++L k +++L++e 
  XP_022151198.1  46 KKRRLTVDQVRLLERNFNVENKLEHERKVQLAEEIGLRPRQVAVWFQNRRARSKTKKIEIDYESLNAEYHKLKKDYTSLVKLNHDLKAEA 135
                     9**********************************************************************************9999875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
MDSETTLFVP EAETNSQSLW ISNSGSSMEG RFLQEQADGA RNSAGKKRRL TVDQVRLLER  60
NFNVENKLEH ERKVQLAEEI GLRPRQVAVW FQNRRARSKT KKIEIDYESL NAEYHKLKKD  120
YTSLVKLNHD LKAEADELRE KWAAAEKMRN PLEPVEVEVE AMDSSVTELG KPNTSTMGED  180
LYNVQMGSSR QEEGSRSSSK SDGFYSESPT MENQSQSDNF LRDEEDELGK LVKLEDEIYA  240
DEFIDSFNFI STAVEDQSLC FWSC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01470.14e-32HD-ZIP family protein