PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022150571.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

G2-like

Protein Properties

Length: 437aa MW: 48988 Da PI: 5.5047

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022150571.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	63.7	3.4e-20	159	211	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 r++W+++LH++F ea+++L G++k Pk il++m+ ++Ltl +v+SHLQk+++ XP_022150571.1 159 SRIVWNSKLHRKFTEALSKL-GNKKSSPKIILKMMNEPSLTLRQVASHLQKFKS 211 79****************.9****************************86 PP
2	Myb_DNA-binding	31.7	3.5e-10	162	210	3	48
SS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 W ++ ++ +a +lG++ ++k I ++m+ +tl q+ s++qk++ XP_022150571.1 162 VWNSKLHRKFTEALSKLGNKksSPKIILKMMNePSLTLRQVASHLQKFK 210 69*********************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 437 aa Download sequence
MANAAVAAVS DFSAALSVLH QTGVPVVLMS TEMNMKAAGK SIAESGFHFL EKPISMEDIE 60 LVWQLVYRKI RNPRANNLGE NANQGKKSEI GGMCGRVVNV ARGVEWNAIE EEGKENYGEN 120 FGEREARLKV SGTVFDYLET TKMNAEEKKN RNECTNKRSR IVWNSKLHRK FTEALSKLGN 180 KKSSPKIILK MMNEPSLTLR QVASHLQKFK SQVKHLNKIT ESDASTPLSR VQLQQLPVKQ 240 NSITNILGQP NYSPDLTDNQ RQFQVLSSCL NGPQLPFQNV DHCHLRMMDQ SNSNSYGTTR 300 SNDLQPETYG GFKGMNLVAD NRIFGDELCM NESSESFVQT SQSNLQYFSA DVDYCPFLSA 360 DAVQELEFAR NLAGCLDVDN ITSGTHRATL DSLNQNVYLK ELDDLLNNTA EDPMVYCCFD 420 GEVNSFDIDQ YSQWLNA

Sequence ? help Back to Top

Protein Sequence Length: 437 aa Download sequence

MANAAVAAVS DFSAALSVLH QTGVPVVLMS TEMNMKAAGK SIAESGFHFL EKPISMEDIE  60
LVWQLVYRKI RNPRANNLGE NANQGKKSEI GGMCGRVVNV ARGVEWNAIE EEGKENYGEN  120
FGEREARLKV SGTVFDYLET TKMNAEEKKN RNECTNKRSR IVWNSKLHRK FTEALSKLGN  180
KKSSPKIILK MMNEPSLTLR QVASHLQKFK SQVKHLNKIT ESDASTPLSR VQLQQLPVKQ  240
NSITNILGQP NYSPDLTDNQ RQFQVLSSCL NGPQLPFQNV DHCHLRMMDQ SNSNSYGTTR  300
SNDLQPETYG GFKGMNLVAD NRIFGDELCM NESSESFVQT SQSNLQYFSA DVDYCPFLSA  360
DAVQELEFAR NLAGCLDVDN ITSGTHRATL DSLNQNVYLK ELDDLLNNTA EDPMVYCCFD  420
GEVNSFDIDQ YSQWLNA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68210.1	5e-19	ARR-B family protein