PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022150086.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

HD-ZIP

Protein Properties

Length: 290aa MW: 33361.4 Da PI: 6.1073

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022150086.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	53.5	4e-17	95	139	12	56
HHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 12 leeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++ Le+ Fe+++++ e++++LAkklgL+ rqV vW+qNrRa++k XP_022150086.1 95 VQMLEKSFEEENKLEPERKTQLAKKLGLQPRQVAVWYQNRRARWK 139 789*****************************************9 PP
2	HD-ZIP_I/II	113.6	1.2e-36	94	176	10	92
HD-ZIP_I/II 10 qvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 +v++LE+sFeee+kLeperK++la++LglqprqvavW+qnrRAR+k+kqlE+dy+ Lk++yd l ++ +++ ke++ L++e++ XP_022150086.1 94 KVQMLEKSFEEENKLEPERKTQLAKKLGLQPRQVAVWYQNRRARWKMKQLERDYDLLKASYDLLLSNYDSIVKENAVLKSEVA 176 589****************************************************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 290 aa Download sequence
MESGRFLFNP PATHGQMLYL GGGGRRMMSM SMQESPKGRP FFRSPHDLYD DEYYDELYPE 60 KKRRLSHDQV CDICLLCCHF HQFSLSSCGR TFFKVQMLEK SFEEENKLEP ERKTQLAKKL 120 GLQPRQVAVW YQNRRARWKM KQLERDYDLL KASYDLLLSN YDSIVKENAV LKSEVASLAE 180 KFLNKELTGE ASVPHITSEP LLANIVHVSS PRSGRKAEDR LSSGSNSSAP VDDNCPQLID 240 SGDSYFPSNE YLQIENDDKS DNGYNFFSDM FAATNQQNQE GGHPAWWAWP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	134	142	RRARWKMKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01470.1	3e-73	HD-ZIP family protein