PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022150085.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family HD-ZIP
Protein Properties Length: 293aa    MW: 33799.9 Da    PI: 6.1072
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022150085.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox53.54e-17951391256
                     HHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox  12 leeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     ++ Le+ Fe+++++  e++++LAkklgL+ rqV vW+qNrRa++k
  XP_022150085.1  95 VQMLEKSFEEENKLEPERKTQLAKKLGLQPRQVAVWYQNRRARWK 139
                     789*****************************************9 PP
2HD-ZIP_I/II111.55.5e-36941741090
     HD-ZIP_I/II  10 qvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 
                     +v++LE+sFeee+kLeperK++la++LglqprqvavW+qnrRAR+k+kqlE+dy+ Lk++yd l ++ +++ ke++ L++e
  XP_022150085.1  94 KVQMLEKSFEEENKLEPERKTQLAKKLGLQPRQVAVWYQNRRARWKMKQLERDYDLLKASYDLLLSNYDSIVKENAVLKSE 174
                     589*************************************************************************99976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MESGRFLFNP PATHGQMLYL GGGGRRMMSM SMQESPKGRP FFRSPHDLYD DEYYDELYPE  60
KKRRLSHDQV CDICLLCCHF HQFSLSSCGR TFFKVQMLEK SFEEENKLEP ERKTQLAKKL  120
GLQPRQVAVW YQNRRARWKM KQLERDYDLL KASYDLLLSN YDSIVKENAV LKSEYFQVAS  180
LAEKFLNKEL TGEASVPHIT SEPLLANIVH VSSPRSGRKA EDRLSSGSNS SAPVDDNCPQ  240
LIDSGDSYFP SNEYLQIEND DKSDNGYNFF SDMFAATNQQ NQEGGHPAWW AWP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1134142RRARWKMKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01470.14e-71HD-ZIP family protein