PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022149969.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

WRKY

Protein Properties

Length: 715aa MW: 78712.1 Da PI: 4.8144

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022149969.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	103.6	1.1e-32	245	301	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +DgynWrKYGqK+vkgse+prsYY+Ct+++C+vkkkvers d++++ei+Y+g+Hnh XP_022149969.1 245 EDGYNWRKYGQKQVKGSEYPRSYYKCTHPTCQVKKKVERSL-DGQITEIIYKGNHNHA 301 7**************************************.*************7 PP
2	WRKY	102.4	2.6e-32	460	517	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK+vkg+++prsYY+CtsagC+v+k+ver++++ k+v++tYeg+Hnhe XP_022149969.1 460 EDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCSVRKHVERASDNLKCVITTYEGRHNHE 517 8********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 715 aa Download sequence
MEEYGEQRTP TSTPDFAGNE AVPDSDDKRA SKRGRPKINA ARFRTTTPPL ASPIVGSPCL 60 TIPPGISPNL LFDSPIMLFN TQDVPSPTTG SFPIVPVKDE YSLLNAVMPE DGSIHGSEDS 120 YFRFTPQADH DSLQGLLRLE NQEADIDHQA FESEKTLMDF EFPPDFPKEA SVLKYDLASS 180 TDIDLFDGKI VNGNCDNMEI CVPDIADNPS SVPESSKRED IGTQHPLEGE QKGSYVPLGM 240 LRTSEDGYNW RKYGQKQVKG SEYPRSYYKC THPTCQVKKK VERSLDGQIT EIIYKGNHNH 300 AKPDPNRRAM LGSVLALDDA SENGEGCGSR AKAEAGLTWR NTQYGWSVDG LERTSSASVL 360 TELSDPLLNP QGKTVGVFES VGTPELSSTV ASHDDDDGGG DDDDDHTTQG SISVCVEADD 420 VEPELKRRRK EGNSIETNLA SRSREPRVVV QIESEIDILE DGYRWRKYGQ KVVKGNPNPR 480 SYYKCTSAGC SVRKHVERAS DNLKCVITTY EGRHNHEVPA ARNSNQVNSS NGNAQPSASH 540 VQPRNLNIPK SETQIQDLAA RFYPKPEFNN DYQRSACFDT FSSDMKLGAP SLCQMKFPPL 600 QNTLPYSPFG LSSKHCTTSI AGSLASVVPD FPISLPLNQN LSAAGFDFTN GRPIPPFQVF 660 LAGQQLRDTE RFLTPKQEHD DDNICVPFQP IVDSTNGSSS SSVSSVYQQI MGNFP

Sequence ? help Back to Top

Protein Sequence Length: 715 aa Download sequence

MEEYGEQRTP TSTPDFAGNE AVPDSDDKRA SKRGRPKINA ARFRTTTPPL ASPIVGSPCL  60
TIPPGISPNL LFDSPIMLFN TQDVPSPTTG SFPIVPVKDE YSLLNAVMPE DGSIHGSEDS  120
YFRFTPQADH DSLQGLLRLE NQEADIDHQA FESEKTLMDF EFPPDFPKEA SVLKYDLASS  180
TDIDLFDGKI VNGNCDNMEI CVPDIADNPS SVPESSKRED IGTQHPLEGE QKGSYVPLGM  240
LRTSEDGYNW RKYGQKQVKG SEYPRSYYKC THPTCQVKKK VERSLDGQIT EIIYKGNHNH  300
AKPDPNRRAM LGSVLALDDA SENGEGCGSR AKAEAGLTWR NTQYGWSVDG LERTSSASVL  360
TELSDPLLNP QGKTVGVFES VGTPELSSTV ASHDDDDGGG DDDDDHTTQG SISVCVEADD  420
VEPELKRRRK EGNSIETNLA SRSREPRVVV QIESEIDILE DGYRWRKYGQ KVVKGNPNPR  480
SYYKCTSAGC SVRKHVERAS DNLKCVITTY EGRHNHEVPA ARNSNQVNSS NGNAQPSASH  540
VQPRNLNIPK SETQIQDLAA RFYPKPEFNN DYQRSACFDT FSSDMKLGAP SLCQMKFPPL  600
QNTLPYSPFG LSSKHCTTSI AGSLASVVPD FPISLPLNQN LSAAGFDFTN GRPIPPFQVF  660
LAGQQLRDTE RFLTPKQEHD DDNICVPFQP IVDSTNGSSS SSVSSVYQQI MGNFP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56270.1	6e-91	WRKY family protein