PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022149798.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | GATA | ||||||||
Protein Properties | Length: 301aa MW: 33476.1 Da PI: 6.7025 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 55.9 | 5.9e-18 | 229 | 265 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 C++Cgt++ Tp++Rrgpdg++tLCnaCGl+++ kg+ XP_022149798.1 229 CRHCGTSEksTPMMRRGPDGPRTLCNACGLMWANKGT 265 **********************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 301 aa Download sequence |
MDGIHASDGR MHMGHAQHSI QSVQDPEHHD LHYMSNGNGM SDEHENEGHG IMVVEREAPS 60 DHGDLAENRG VMVDRGGDNC DQLTLSYQGQ VYVFDSVSPE KVQAVLLLLG GREVPLRVPS 120 IPISNQQNDR HLTDEAFNQA LASIPPRLSV PQRLASLIRF REKRKERNFD KKIRYTVRKE 180 VALRMQRNKG QFTSSKPIHE DSSSAITSWE SNESWSTDGN GSQQQEILCR HCGTSEKSTP 240 MMRRGPDGPR TLCNACGLMW ANKGTLRDLS KAPNQGGQAS TLNRNENVLQ NGDSESDPKS 300 A |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G21175.1 | 1e-121 | GATA family protein |