PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022149679.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | ERF | ||||||||
Protein Properties | Length: 280aa MW: 31133.1 Da PI: 9.601 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65.1 | 1.4e-20 | 133 | 182 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +++GVr+++ +grW+AeIrdp +r kr++lg+f++aeeAa+ +++a++kl g XP_022149679.1 133 KFRGVRQRP-WGRWAAEIRDP----IRrKRIWLGTFDSAEEAAAVYDRAALKLQG 182 89*******.**********7....246************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 280 aa Download sequence |
MAGKMVPKEP VNDPLLSVTV SLRSNISVRD MASLPEYRTN RHRKPPISGA SVAEQRKFQQ 60 KLVRIIVADA DATDSSSEDE VIIGSRTTVR RQAREIIFER YSVLTGSSES SVNEICKKQR 120 PRSRRSKFCR RRKFRGVRQR PWGRWAAEIR DPIRRKRIWL GTFDSAEEAA AVYDRAALKL 180 QGPNATTNFS DAGAVATAAD DGSKQQKGLD SHNTTAVSSP TSVLHYDGVS IPFDALFSGE 240 ADGFGLEMAA AAWLPAARKQ CGEEDFGEFD LDYFLVDVIY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27950.1 | 2e-24 | ERF family protein |