PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022149354.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

FAR1

Protein Properties

Length: 667aa MW: 77436.7 Da PI: 8.047

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022149354.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	68.9	1.3e-21	60	143	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 ++Yn YAkevGF+vr+++s +++++e + + ++Cs +g+++ ++ + r r+ trtgC a+l++++ ++++w+v ++ leHnH l XP_022149354.1 60 NYYNCYAKEVGFRVRVKNSWFKRNSREKYGAVLCCSSQGFKRIKDVN-----RLRKDTRTGCPAMLRMRLVDSQRWRVLEVTLEHNHLL 143 69***************************************9988.....99*******************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 667 aa Download sequence
MEETSLTNEY SPHVEHSEIH KDGDGDEDAP ISELDGHNGR KEFVQPAVGM EFESYEDAYN 60 YYNCYAKEVG FRVRVKNSWF KRNSREKYGA VLCCSSQGFK RIKDVNRLRK DTRTGCPAML 120 RMRLVDSQRW RVLEVTLEHN HLLGSKIYKS MKKANGPPKR KTQLSSDAGD RTIKLYRALV 180 IDAGSSGTAD VNAKKVRIFP DHSNHLNLKK GDXQAIYNYL CRMQLTNPNF YYLMDLNDEG 240 RLRNVIWVDA RSRAACAFFG DVVCFDNSYL SNKYEIPLVA FVGINHHGQS VLLGCGLLAG 300 ETTESYTWLF KAWLSCMSGR SPQTIITDRC NHLLAAIAEV FPKSQHRFGL SCIMKKVPEK 360 LGGLRNYDAI RKAFNKAVYE TLKVIEFDSA WGFMIQRFAI GDHEWLRSLF EDRGRWAPVY 420 LKDTFFAGIS AMRQGEKQNP FFDRYVHKQT PLKEFLDKYE LALQKNHKEE AFSDIESRNS 480 FPTLKTXCSF ELQLSKVFTR EIFTRFQFEV EEMYSCFSTT QLQVDGPLII FLVKERVVVE 540 GNRREIREYE VLYNRTAGEV RCICSCFNFY GYLCRHALCV LNFNGVEEIP SKYILSRWKK 600 DYKRLYVPDY ETNLADVPDR VQWFNQLYKC ALQVVEEGVI SLDHYKAALQ AFEESLSRVH 660 EVEDKHE

Sequence ? help Back to Top

Protein Sequence Length: 667 aa Download sequence

MEETSLTNEY SPHVEHSEIH KDGDGDEDAP ISELDGHNGR KEFVQPAVGM EFESYEDAYN  60
YYNCYAKEVG FRVRVKNSWF KRNSREKYGA VLCCSSQGFK RIKDVNRLRK DTRTGCPAML  120
RMRLVDSQRW RVLEVTLEHN HLLGSKIYKS MKKANGPPKR KTQLSSDAGD RTIKLYRALV  180
IDAGSSGTAD VNAKKVRIFP DHSNHLNLKK GDXQAIYNYL CRMQLTNPNF YYLMDLNDEG  240
RLRNVIWVDA RSRAACAFFG DVVCFDNSYL SNKYEIPLVA FVGINHHGQS VLLGCGLLAG  300
ETTESYTWLF KAWLSCMSGR SPQTIITDRC NHLLAAIAEV FPKSQHRFGL SCIMKKVPEK  360
LGGLRNYDAI RKAFNKAVYE TLKVIEFDSA WGFMIQRFAI GDHEWLRSLF EDRGRWAPVY  420
LKDTFFAGIS AMRQGEKQNP FFDRYVHKQT PLKEFLDKYE LALQKNHKEE AFSDIESRNS  480
FPTLKTXCSF ELQLSKVFTR EIFTRFQFEV EEMYSCFSTT QLQVDGPLII FLVKERVVVE  540
GNRREIREYE VLYNRTAGEV RCICSCFNFY GYLCRHALCV LNFNGVEEIP SKYILSRWKK  600
DYKRLYVPDY ETNLADVPDR VQWFNQLYKC ALQVVEEGVI SLDHYKAALQ AFEESLSRVH  660
EVEDKHE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	0.0	FAR1 family protein