PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022148477.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | MYB | ||||||||
Protein Properties | Length: 315aa MW: 35202.3 Da PI: 9.6798 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 26.9 | 1.2e-08 | 27 | 72 | 2 | 45 |
SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 +WT+ E +l+ +a + + ++ +W+++a++++ g+t +++ + XP_022148477.1 27 SKWTAAENKLFENALAIHDTDtpdRWHKVAAMIP-GKTVGDVIRQYK 72 58********************************.****99998876 PP | |||||||
2 | Myb_DNA-binding | 46.3 | 9.7e-15 | 134 | 178 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT++E++l++ + k++G+g+W+ I+r + +Rt+ q+ s+ qky XP_022148477.1 134 PWTEDEHKLFLMGLKKYGKGDWRNISRNFVVTRTPTQVASHAQKY 178 8*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 315 aa Download sequence |
MKWEMEILSP PSLVSTMSWS SGDGKSSKWT AAENKLFENA LAIHDTDTPD RWHKVAAMIP 60 GKTVGDVIRQ YKELEADVSS IEAGLIPIPG YDTSQFTLDW VNSHSYDGFK QSYGLVGKRS 120 SGRSTDQERK KGVPWTEDEH KLFLMGLKKY GKGDWRNISR NFVVTRTPTQ VASHAQKYFI 180 RQLSGGKDKR RASIHDITTV NLNDTRSPSP DDKKSLSPEH AAVLPRQPNP SSTTTGHGNA 240 FNWNHQHHHH QHHNSSGAAI AFNHPNGNVF MSPTAFGVNS WLPEHHLQKG AVNQPFIGPQ 300 NMIFQLQTGH CFPHG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G58900.1 | 2e-95 | MYB_related family protein |