PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022147681.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family GATA
Protein Properties Length: 295aa    MW: 32216 Da    PI: 9.5075
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022147681.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.62e-19159192134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     Cs C+ttkTplWR+gp+g+k+LCnaCG+++rk +
  XP_022147681.1 159 CSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKAR 192
                     *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MAPPYQNSFP SHHHHDLDHL FFPTTPQPSS SSSSTLSFPL HLDHATHSDD HSHPLNLRQD  60
QGGRIVGCNS DDGVETGLRF TIWKQIDKSG SSIDDDLALK WDSSSSNIRM VINSNPTETP  120
APINGGRNFQ DLNPSLSFDQ TNKRRTLNVD DNNSVTRTCS DCNTTKTPLW RSGPRGPKSL  180
CNACGIRQRK ARRAAMAAAA EEAAAANGTI PYGGKPAAAV VLKPNKTAVQ HKIIKPAATL  240
KRKCKDVAAG RGGGGRKKLH FEDSSYQRVF PPDEREAAIL LMTLSYGWPS SWINL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26150.14e-25GATA family protein