PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022147058.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | GRF | ||||||||
Protein Properties | Length: 477aa MW: 52474.6 Da PI: 9.5749 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 75.5 | 5.6e-24 | 141 | 185 | 1 | 45 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCsr++++ +k+CErH+hrgr+rsrk++e+ XP_022147058.1 141 DPEPGRCRRTDGKKWRCSRNTVPHQKYCERHMHRGRQRSRKPVEA 185 79****************************************997 PP | |||||||
2 | WRC | 61.9 | 9.6e-20 | 360 | 399 | 2 | 41 |
WRC 2 aepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrk 41 epgrCrRtDGKkWRC+r+v++++k+C H+hrg+++ +k XP_022147058.1 360 LEPGRCRRTDGKKWRCRRNVIPNQKYCGLHMHRGSKKHSK 399 59********************************887766 PP | |||||||
3 | QLQ | 35.3 | 3.6e-13 | 80 | 114 | 3 | 37 |
QLQ 3 FTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +T Ql++L +Q+l+ K+L+a++ vP +Ll +i+k XP_022147058.1 80 LTVGQLHELQQQVLIHKHLVAGLRVPTHLLIPIWK 114 6777*****************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 477 aa Download sequence |
MEVHPLQSIY SSETVRVATP LKAGEAAMTV TTMEVKMESR WPENDELSAP INLGLQIGTN 60 SAGNQSERTS IVHRRTESLL TVGQLHELQQ QVLIHKHLVA GLRVPTHLLI PIWKSVVRNL 120 GSNINVIGFS HLGIDYRSMM DPEPGRCRRT DGKKWRCSRN TVPHQKYCER HMHRGRQRSR 180 KPVEASENDS PSKRILLNNP DEVVRCTVVA PASTICGNNK TKNTFPPIES VVPGPETVAE 240 TITSSTHAAT AILTSCADAT RTIRMVPASA PNTIATHITA VPCSNPTAVT SIPTSYMIES 300 KDVYNISCRE NFSRSRNIFG RSDTNVQKIP PPSLGFSPNS VLQVPGCSSS YCDSKINLEL 360 EPGRCRRTDG KKWRCRRNVI PNQKYCGLHM HRGSKKHSKV AQNETVLSLS AATTGTLLPS 420 ATMLLTKPDP ATPNTNLSMS IQAGDKRRHD EERSNVSSSS ETTISDTTIT AYESISP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37740.1 | 5e-31 | GRF family protein |