PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022146674.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 224aa MW: 24995.1 Da PI: 7.1467 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 62.7 | 4.2e-20 | 16 | 64 | 1 | 49 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49 k+ien+ r +tfskRr gi KKA+EL +LC+aev v++fs+ gk + + XP_022146674.1 16 KKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSF 64 68******************************************97776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence |
MEGKKQTKGR QKIEMKKIEN EDDRLITFSK RRSGIYKKAS ELATLCGAEV GVVVFSPAGK 60 PFSFAHPSIE SVANKFINET PQPNDNTHPL VEAHRRVRIN ELNQQHNQLL SQLEAEKEKG 120 KALEKMKKVR GNSNGRGWWE TPTEEMGMEE LQQVDASLGD LYTNVCHQLR ERGVIGSSSS 180 SYSSMPFNGA GEETIPFNIL ANGPPPPTNA YLPHAFDYGQ DQLP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04100.1 | 1e-35 | M-type_MADS family protein |