PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022146650.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

WRKY

Protein Properties

Length: 428aa MW: 47065.2 Da PI: 5.7226

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022146650.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.9	6.8e-31	219	277	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+ XP_022146650.1 219 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 277 699**********************998**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 428 aa Download sequence
MENYQGDLTD IVRGSSSSAT YGCKIEDPFG FSSAEWQFHP SMSNLDQLEQ QPTSQQHQYS 60 SFGDPFCAAA MRDPLLHELD MCGSSSSPSA ASNSSTTCTF FNGGHDQDHD HHLVIKTPPS 120 SSNNTNIFSR MLQISPSTNK FPISSPHSSP LFPNSTSSTP LINANSSEFH HFLDNTAVQI 180 SSPRNPTGIK RRKSQARKVV CVPAPVAASS RPNGEVIPSD LWAWRKYGQK PIKGSPYPRG 240 YYRCSSSKGC SARKQVERSR TDPNMLVITY TSEHNHPWPT QRNALAGSSR SQQSKSSAPN 300 SKLNPQNPTP DQPADTNKTQ VFGAPTNVKE EAIDHQEIIQ AEDNGDFSEG FQYMPTNNNN 360 NNQSDDFFAD LEELDTDPLN LLFSTGGDDD GQQKEAKFGL FDWAAENNNN NANSTSFEEA 420 AAGKRGFY

Sequence ? help Back to Top

Protein Sequence Length: 428 aa Download sequence

MENYQGDLTD IVRGSSSSAT YGCKIEDPFG FSSAEWQFHP SMSNLDQLEQ QPTSQQHQYS  60
SFGDPFCAAA MRDPLLHELD MCGSSSSPSA ASNSSTTCTF FNGGHDQDHD HHLVIKTPPS  120
SSNNTNIFSR MLQISPSTNK FPISSPHSSP LFPNSTSSTP LINANSSEFH HFLDNTAVQI  180
SSPRNPTGIK RRKSQARKVV CVPAPVAASS RPNGEVIPSD LWAWRKYGQK PIKGSPYPRG  240
YYRCSSSKGC SARKQVERSR TDPNMLVITY TSEHNHPWPT QRNALAGSSR SQQSKSSAPN  300
SKLNPQNPTP DQPADTNKTQ VFGAPTNVKE EAIDHQEIIQ AEDNGDFSEG FQYMPTNNNN  360
NNQSDDFFAD LEELDTDPLN LLFSTGGDDD GQQKEAKFGL FDWAAENNNN NANSTSFEEA  420
AAGKRGFY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G30650.1	2e-70	WRKY family protein