PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022146223.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

AP2

Protein Properties

Length: 496aa MW: 54417.9 Da PI: 6.796

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022146223.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	53.6	5.6e-17	158	207	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_022146223.1 158 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHSAARAYDRAAIKFRG 207 78*****************......55**********************997 PP
2	AP2	40.9	5.1e-13	250	300	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng...krkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ g +k+++lg f+++ eAa+a+++a+ k +g XP_022146223.1 250 SKYRGVTLHK-CGRWEAR---M---GqllGKKYIYLGLFDSEVEAARAYDKAAIKCNG 300 89******.7**...5...334336******99********99776 PP

Sequence ? help Back to Top
Protein Sequence Length: 496 aa Download sequence
MFDLNLNVDS PDATQNGDSV MFFEKLPQGS GNQMDEYESG TSNSSIVNAD TSSNGGDDDS 60 CSTRAAGELF TFNFEILKAG SANDVVTKEF FPIGGTVNAD FGSLQGQNSA SSSSSSSRKN 120 WINLAFDRSG SGGEGRIVQP VQPQQVKKSR RGPRSRSSQY RGVTFYRRTG RWESHIWDCG 180 KQVYLGGFDT AHSAARAYDR AAIKFRGVDA DINFNLSDYE EDLKQMKNLS KEEFVHILRR 240 QSTGFSRGSS KYRGVTLHKC GRWEARMGQL LGKKYIYLGL FDSEVEAARA YDKAAIKCNG 300 REAVTNFEPS TYEGERVSEG SSEGGRNMLD LNLGISPPSL ENCQKDNEGH LRFQSGPYYA 360 NDRSTMMESN ADAAVGDPPF KGLVMTSEHA PLWNGLQSSF FPNEESVTEK RLALGSSQGV 420 PDWPWQIHGQ VNATQVPLFS AAASSGFSFS ATHLPAAIHP PRQPGLTAHN LHFTPAKASL 480 NSSQYRHQFN PQQAPP

Sequence ? help Back to Top

Protein Sequence Length: 496 aa Download sequence

MFDLNLNVDS PDATQNGDSV MFFEKLPQGS GNQMDEYESG TSNSSIVNAD TSSNGGDDDS  60
CSTRAAGELF TFNFEILKAG SANDVVTKEF FPIGGTVNAD FGSLQGQNSA SSSSSSSRKN  120
WINLAFDRSG SGGEGRIVQP VQPQQVKKSR RGPRSRSSQY RGVTFYRRTG RWESHIWDCG  180
KQVYLGGFDT AHSAARAYDR AAIKFRGVDA DINFNLSDYE EDLKQMKNLS KEEFVHILRR  240
QSTGFSRGSS KYRGVTLHKC GRWEARMGQL LGKKYIYLGL FDSEVEAARA YDKAAIKCNG  300
REAVTNFEPS TYEGERVSEG SSEGGRNMLD LNLGISPPSL ENCQKDNEGH LRFQSGPYYA  360
NDRSTMMESN ADAAVGDPPF KGLVMTSEHA PLWNGLQSSF FPNEESVTEK RLALGSSQGV  420
PDWPWQIHGQ VNATQVPLFS AAASSGFSFS ATHLPAAIHP PRQPGLTAHN LHFTPAKASL  480
NSSQYRHQFN PQQAPP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28550.3	1e-129	AP2 family protein