PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022145828.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family NAC
Protein Properties Length: 268aa    MW: 30374.1 Da    PI: 4.4213
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022145828.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM57.35.4e-18241572128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvka.eekewyfFskrdkkyat.gkrknratk.....sgyWkatgk 88 
                      +G+ F+P+d+ l+ ++L +k+ g k      ++++d+y + ePw++ +++ + + +++yfF+k ++++++ g+ +  +t+      g W+   +
  XP_022145828.1  24 IVGYNFEPSDQSLLEDFLFNKIYGYKYLQ-GPVSDCDLYGHsEPWEICESFGGiDGEDLYFFTKLNRSTNNsGQLSAHVTRkvglaGGNWSGENT 117
                     68**********************99655.78*******8769****854433377899******99998734434445544556699******* PP

             NAM  89 dkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      ++++s+  +++ g  k + + + r p  ++++W+mhey+l
  XP_022145828.1 118 PESIFSTkYQRDFGYCKRFRYENDRLPA-NHAEWIMHEYSL 157
                     *****98566779*******99777777.89********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MAMFIAIAAA LDSIGMIGNF HSLIVGYNFE PSDQSLLEDF LFNKIYGYKY LQGPVSDCDL  60
YGHSEPWEIC ESFGGIDGED LYFFTKLNRS TNNSGQLSAH VTRKVGLAGG NWSGENTPES  120
IFSTKYQRDF GYCKRFRYEN DRLPANHAEW IMHEYSLHED CILKVMAPKT IYKLPCRRKI  180
TTNQDTSNVP SILEMTTNQD NSNVPSIPEM TTNQDTSDVL WVPKTATHEV MSDVFFLPQM  240
ANYDDMIDVF DLPAMPIAHD TSDVPDIL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24430.23e-12NAC family protein