PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022145810.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

Nin-like

Protein Properties

Length: 986aa MW: 108167 Da PI: 5.2998

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022145810.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	92.5	3.2e-29	589	640	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek++sl++l++yFs+++kdAAk++gvc+T+LKriCRq+GI RWP+Rki+++ XP_022145810.1 589 AEKNVSLSVLQQYFSGSLKDAAKSIGVCPTTLKRICRQHGILRWPSRKINKV 640 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 986 aa Download sequence
MENPFSSKEQ GMGYWGPSRT QPETLASSDA GMRIMSPEDV LHGFSELMNS DSYAGWGSNY 60 ATIDQIFTSC GFSSITPMGT STSLECSTFP EGNYGTFPLN EISGASISMV NSFNYGDKTM 120 FQRPDTEFGV SDVSDNANEA GSKSNDVLPD MDSCLISRPL GWSLDDRMLR ALSLFKESSP 180 GGILAQVWVP VKHGNQFFLS TSDQPYLLDQ MLTGYREVSR SFKFSAEGKP GSFLGLPGRV 240 FISKIPEWTS NVRYYSDNEY LRMKHAIGHE VYGSVALPIT NNELEGSCCA VLEVVTTREK 300 PNFDAEIDMV SRALQTVSLS TIAPPRLYPQ CLKKNQRSAL AEITDVLRAV CHAHSLPMAL 360 TWIPCCYTLE AVDEAERVRV KENNIYPKEK SVLCIEETAC YVNDKATQGF VHACVEHHLE 420 EGQGIAGKAL KSNHPFFYPD VKTYDINEYP LVHHARKFCL NAAVAIRLRS TYTGNDDYIL 480 EFFLPVNMKG SSEQQLLLNN LSGTMQRMCR SLRTVSKEEL VGAEEPITGF QSGSIGKSAT 540 TSRRNSQPTV TDSETRVSNS IDGGTEVECP KKQITNGSRK PGEKKRATAE KNVSLSVLQQ 600 YFSGSLKDAA KSIGVCPTTL KRICRQHGIL RWPSRKINKV NRSLRKIQTV LDSVKGVEGG 660 LKFDPTTGGL MAAGSLIPEL NGHNNLLFSD NNPSIRNLEP FLQDVSSVPS ATFSSQNSTM 720 KLEMDESAVA ISQRMSSRNV MVPEEEPNVC QLDCSEGSKS IGIDAASCQL AGLDMMTWDV 780 SGNVPGSIVA KKIKRLDFSE NDFRSSGADC PFLAKSSSSF AAVDEVCTVL QGDDGITEHY 840 QPATSSMTDS SNGSGLLMHG SSSSCQSIEE GKHLQEKISS VDSDSKIIVK ASYKEDTVRF 900 KFDPSLGYLL LYEEVGKRFK LNQGTFQLKY LDDEKEWVML VSNSDLQECL EVMDEIGTKN 960 VKFLVRDVAC SVGSSGSNSC FLSGGS

Sequence ? help Back to Top

Protein Sequence Length: 986 aa Download sequence

MENPFSSKEQ GMGYWGPSRT QPETLASSDA GMRIMSPEDV LHGFSELMNS DSYAGWGSNY  60
ATIDQIFTSC GFSSITPMGT STSLECSTFP EGNYGTFPLN EISGASISMV NSFNYGDKTM  120
FQRPDTEFGV SDVSDNANEA GSKSNDVLPD MDSCLISRPL GWSLDDRMLR ALSLFKESSP  180
GGILAQVWVP VKHGNQFFLS TSDQPYLLDQ MLTGYREVSR SFKFSAEGKP GSFLGLPGRV  240
FISKIPEWTS NVRYYSDNEY LRMKHAIGHE VYGSVALPIT NNELEGSCCA VLEVVTTREK  300
PNFDAEIDMV SRALQTVSLS TIAPPRLYPQ CLKKNQRSAL AEITDVLRAV CHAHSLPMAL  360
TWIPCCYTLE AVDEAERVRV KENNIYPKEK SVLCIEETAC YVNDKATQGF VHACVEHHLE  420
EGQGIAGKAL KSNHPFFYPD VKTYDINEYP LVHHARKFCL NAAVAIRLRS TYTGNDDYIL  480
EFFLPVNMKG SSEQQLLLNN LSGTMQRMCR SLRTVSKEEL VGAEEPITGF QSGSIGKSAT  540
TSRRNSQPTV TDSETRVSNS IDGGTEVECP KKQITNGSRK PGEKKRATAE KNVSLSVLQQ  600
YFSGSLKDAA KSIGVCPTTL KRICRQHGIL RWPSRKINKV NRSLRKIQTV LDSVKGVEGG  660
LKFDPTTGGL MAAGSLIPEL NGHNNLLFSD NNPSIRNLEP FLQDVSSVPS ATFSSQNSTM  720
KLEMDESAVA ISQRMSSRNV MVPEEEPNVC QLDCSEGSKS IGIDAASCQL AGLDMMTWDV  780
SGNVPGSIVA KKIKRLDFSE NDFRSSGADC PFLAKSSSSF AAVDEVCTVL QGDDGITEHY  840
QPATSSMTDS SNGSGLLMHG SSSSCQSIEE GKHLQEKISS VDSDSKIIVK ASYKEDTVRF  900
KFDPSLGYLL LYEEVGKRFK LNQGTFQLKY LDDEKEWVML VSNSDLQECL EVMDEIGTKN  960
VKFLVRDVAC SVGSSGSNSC FLSGGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43500.1	0.0	Nin-like family protein