PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022145200.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family HD-ZIP
Protein Properties Length: 286aa    MW: 31922.7 Da    PI: 7.5382
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022145200.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.32.6e-18135189256
                     T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     rk+ +++keq  +Lee F+++++++ +++  LAk+l+L  rqV vWFqNrRa+ k
  XP_022145200.1 135 RKKLRLSKEQSMVLEETFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTK 189
                     788899***********************************************98 PP
2HD-ZIP_I/II127.55.7e-41135224191
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                     +kk+rlskeq+ +LEe+F+e+++L+p++K +la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+kev+eLr +l
  XP_022145200.1 135 RKKLRLSKEQSMVLEETFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVQELR-AL 224
                     69*************************************************************************************9.55 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MGGTARDDDL ALTLTLGFGV TTQPTHLHRP PHSIHNHLRK ASWNELFQFS DRNADTRSFL  60
RGIDVNRLPT TVDGEEENGV SSPNSTISSI SGKRSEREAV GDEAEAEAEA EAERASCSRG  120
SDDEDGGGGD GDASRKKLRL SKEQSMVLEE TFKEHNTLNP KQKLALAKQL NLRPRQVEVW  180
FQNRRARTKL KQTEVDCEYL KRCCENLTEE NRRLQKEVQE LRALKLSPQL YMHMNPPTTL  240
TMCPQCERVA VASSSSTSAA PTRHPPATSQ RPSVAINPWG VLPIQR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1134140SRKKLRL
2184192RRARTKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60390.15e-73HD-ZIP family protein