PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022144339.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

Protein Properties

Length: 393aa MW: 44573.4 Da PI: 7.7712

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022144339.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	66.8	3.1e-21	34	112	13	97
TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 +++lv+p+kfa+ ++kk+ + t+tl+ +sg +W+v l + ++++ +++ GW++Fvka+ L+++D ++F+++g s+f v vf XP_022144339.1 34 EQQLVIPNKFAN--NLKKKLPSTVTLKGPSGATWDVGL--TSNDNKLYFKHGWQDFVKAHSLEQNDLLIFRYNGGSQF--DVLVF 112 578*****94..45566999************..*******************************99999..66666 PP
2	B3	44.5	2.7e-14	273	369	1	98
EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sefel 92 f+ v+ ps+v ++ l +p + ++++ + ++ +++l+ + +W k++++++++ lt+GWk+F+ +n+L+e D++vF+ + ++ l XP_022144339.1 273 FKVVMRPSHVYRRFFLFIPTQWVTKNlS-LRNQ--DVILRF-GNDEWPTKFNFTQSRQCGGLTSGWKHFAIDNNLEEYDVCVFEPVvKTsGPVVL 363 778999******************53.4344..455443.5578888888866666667*********************55355566666 PP EEEEE- CS B3 93 vvkvfr 98 vk+fr XP_022144339.1 364 EVKIFR 369 777776 PP

Sequence ? help Back to Top
Protein Sequence Length: 393 aa Download sequence
MDKACDGSSK WAEDIYWTHF QFTHFYQILA GGCEQQLVIP NKFANNLKKK LPSTVTLKGP 60 SGATWDVGLT SNDNKLYFKH GWQDFVKAHS LEQNDLLIFR YNGGSQFDVL VFDWKSFCEK 120 EASYFVKICE HKKGDDGYQA KRKLREPSLD DFDADTNNGA ECASSENIIH DDSMERMIQD 180 VVSKATNLNG QPEVCSAEPI QTMRTRRKKE TPNNATILTP PPIQISDSDV AATPIKKIGS 240 YAEHYVSNRR AITEDDKINA LKLAEAASSD GSFKVVMRPS HVYRRFFLFI PTQWVTKNLS 300 LRNQDVILRF GNDEWPTKFN FTQSRQCGGL TSGWKHFAID NNLEEYDVCV FEPVVKTSGP 360 VVLEVKIFRV VEDAIPLTRV SSSKSNRKLI KAT

Sequence ? help Back to Top

Protein Sequence Length: 393 aa Download sequence

MDKACDGSSK WAEDIYWTHF QFTHFYQILA GGCEQQLVIP NKFANNLKKK LPSTVTLKGP  60
SGATWDVGLT SNDNKLYFKH GWQDFVKAHS LEQNDLLIFR YNGGSQFDVL VFDWKSFCEK  120
EASYFVKICE HKKGDDGYQA KRKLREPSLD DFDADTNNGA ECASSENIIH DDSMERMIQD  180
VVSKATNLNG QPEVCSAEPI QTMRTRRKKE TPNNATILTP PPIQISDSDV AATPIKKIGS  240
YAEHYVSNRR AITEDDKINA LKLAEAASSD GSFKVVMRPS HVYRRFFLFI PTQWVTKNLS  300
LRNQDVILRF GNDEWPTKFN FTQSRQCGGL TSGWKHFAID NNLEEYDVCV FEPVVKTSGP  360
VVLEVKIFRV VEDAIPLTRV SSSKSNRKLI KAT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G33280.1	4e-75	B3 family protein