PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022144294.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB

Protein Properties

Length: 234aa MW: 26155.3 Da PI: 9.1998

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022144294.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.1	4.2e-18	35	80	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd +l ++v ++G+++W++I+r++ gR++k+c++rw + XP_022144294.1 35 KGPWSAEEDRILTQLVGRYGPRNWSLISRYIK-GRSGKSCRLRWCNQ 80 79***************************9.*********985 PP
2	Myb_DNA-binding	53.9	4e-17	89	131	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++++ Ede ++ a++++G++ W+tIar ++ gRt++ +k++w++ XP_022144294.1 89 PFSPTEDETILAAHARFGNR-WATIARLLP-GRTDNAVKNHWNST 131 79****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 234 aa Download sequence
MEALMRSSSS SSSSDSTSSD SSFSGKASRR PEKIKGPWSA EEDRILTQLV GRYGPRNWSL 60 ISRYIKGRSG KSCRLRWCNQ LSPSVEHRPF SPTEDETILA AHARFGNRWA TIARLLPGRT 120 DNAVKNHWNS TLKRRARERQ QQLVMDGIAP ENHGNSVNLP SDLKLSVPDL EDDPLTALTL 180 APPGIGGADP RAAAVDDRRI ESLPVGFWDA MRDVIAREVR EYMTTTFMEN PELH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50060.1	1e-56	MYB family protein