PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022143503.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

WRKY

Protein Properties

Length: 731aa MW: 79109.3 Da PI: 6.3482

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022143503.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	102.3	2.8e-32	311	368	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK+vkgse+prsYY+Ct ++Cpvkkkvers+ +++++ei+Y+g Hnh+k XP_022143503.1 311 EDGYNWRKYGQKQVKGSEYPRSYYKCTNPNCPVKKKVERSH-EGHITEIIYKGAHNHPK 368 7**************************************.*************85 PP
2	WRKY	103.2	1.5e-32	526	584	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct +gC+v+k+ver+++d k v++tYeg+Hnh+ XP_022143503.1 526 LDDGYRWRKYGQKVVKGNPNPRSYYKCTNPGCTVRKHVERASHDLKSVITTYEGKHNHD 584 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 731 aa Download sequence
MGRTEDNVAI IGDWVPPSPS PRTFFSAMLG EDVGSRRSMD TTSSDKTEEL FLRPREHMMS 60 ENAIARGGDL PAELGSFSEQ KFRGGLVDRI AARAGFNAPR LNTESIRNTD QSLNSEVKSP 120 YLTIPPGLSP TTLLDSPVFL SNSLAQQSPT TGKFPFLANL SNWSSVTMLS EANNNGGNNP 180 FENNGTSFAF RPMVESGSSF FLGAASKTAS ASILPQSCPR IEAPVPRSEN SFQSHLVEPS 240 LSLPHNRISH HPQAGLSTPQ IDDGAKTVSD DQRPFDSICG GGEHSSPLDE QPDEGEQRGS 300 GDSMAGGAPS EDGYNWRKYG QKQVKGSEYP RSYYKCTNPN CPVKKKVERS HEGHITEIIY 360 KGAHNHPKPS PNRRAAIGSS DSHINMQLEI PAQAGQQSAE GPHWEDSQKG IPTGAPDWMQ 420 DNLEVTSSAA SLGPEYGNQP NPLQAQNGSH IETVEAIDAS STFSNDEDED DRGTHGSITL 480 GYEGEGDESE SKKRKLDAYV TEMSGATRAI REPRVVVQTT SEVDILDDGY RWRKYGQKVV 540 KGNPNPRSYY KCTNPGCTVR KHVERASHDL KSVITTYEGK HNHDVPAARN SSHISSSTSS 600 PATAQNSSVT IQSHVHRPGP SQAQNNIPRF ERPAFGLGGR QQMGTAHGFS FGMNQPGLGN 660 LTMGTALGQA KLPVLPMHPY LAQAHHVNGM GFLLPKGEPN VEPTSDLGLN FSNGSAVYQQ 720 IMSRLPLGPE M

Sequence ? help Back to Top

Protein Sequence Length: 731 aa Download sequence

MGRTEDNVAI IGDWVPPSPS PRTFFSAMLG EDVGSRRSMD TTSSDKTEEL FLRPREHMMS  60
ENAIARGGDL PAELGSFSEQ KFRGGLVDRI AARAGFNAPR LNTESIRNTD QSLNSEVKSP  120
YLTIPPGLSP TTLLDSPVFL SNSLAQQSPT TGKFPFLANL SNWSSVTMLS EANNNGGNNP  180
FENNGTSFAF RPMVESGSSF FLGAASKTAS ASILPQSCPR IEAPVPRSEN SFQSHLVEPS  240
LSLPHNRISH HPQAGLSTPQ IDDGAKTVSD DQRPFDSICG GGEHSSPLDE QPDEGEQRGS  300
GDSMAGGAPS EDGYNWRKYG QKQVKGSEYP RSYYKCTNPN CPVKKKVERS HEGHITEIIY  360
KGAHNHPKPS PNRRAAIGSS DSHINMQLEI PAQAGQQSAE GPHWEDSQKG IPTGAPDWMQ  420
DNLEVTSSAA SLGPEYGNQP NPLQAQNGSH IETVEAIDAS STFSNDEDED DRGTHGSITL  480
GYEGEGDESE SKKRKLDAYV TEMSGATRAI REPRVVVQTT SEVDILDDGY RWRKYGQKVV  540
KGNPNPRSYY KCTNPGCTVR KHVERASHDL KSVITTYEGK HNHDVPAARN SSHISSSTSS  600
PATAQNSSVT IQSHVHRPGP SQAQNNIPRF ERPAFGLGGR QQMGTAHGFS FGMNQPGLGN  660
LTMGTALGQA KLPVLPMHPY LAQAHHVNGM GFLLPKGEPN VEPTSDLGLN FSNGSAVYQQ  720
IMSRLPLGPE M

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56270.1	0.0	WRKY family protein