PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022143484.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family NAC
Protein Properties Length: 300aa    MW: 33427.7 Da    PI: 6.5944
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022143484.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM88.89.4e-28141551128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkk........lelee....vikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknra 77 
                     lppG+rF P+de+l+  yL +k++++             +     ike+d ++++P dLp         ++++k+wy+++ ++ ++++g r +  
  XP_022143484.1  14 LPPGCRFFPSDEQLLRSYLSNKTSATIfpnsphngA---SaacnLIKELDPFDYDPFDLPDfacfsyGSSGRKKHWYYYTATAFRENRGGRIRM- 104
                     79*********************9998555555441...055537***************44777654444778*******9998877766655. PP

             NAM  78 tksgyWkatgkdkevlskkgelvglkktLvfykg.rapkgektdWvmheyrl 128
                      ksgyWk +g+ +ev+ ++g + g+k+++vfy g + ++++kt+W++ ey+l
  XP_022143484.1 105 -KSGYWKRKGRVREVIGHRGIVLGIKRSFVFYLGnSIKNAVKTNWIVYEYAL 155
                     .79*****************************874678899*********87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MEDPQLFTAP SFSLPPGCRF FPSDEQLLRS YLSNKTSATI FPNSPHNGAS AACNLIKELD  60
PFDYDPFDLP DFACFSYGSS GRKKHWYYYT ATAFRENRGG RIRMKSGYWK RKGRVREVIG  120
HRGIVLGIKR SFVFYLGNSI KNAVKTNWIV YEYALGDHLK ASLVLHRVFL SSRGNSILEN  180
GLSSYGEGSV SEVCHNQRDG IGATNMVDAE ACEGDILNTV NGHTRYEMGL GQAMKPNCQV  240
ITDPDSATTT LQVPSEAYPC EMTTPSHVIP TGSMSAHVID KQQLISILER DYLELDDLVD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15500.11e-16NAC family protein