PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022143421.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

NAC

Protein Properties

Length: 348aa MW: 39146.4 Da PI: 8.2469

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022143421.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	88.4	1.3e-27	14	155	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk........lelee....vikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknra 77 lppG+rF P+de+l+ yL +k++++ + ike+d ++++P dLp ++++k+wy+++ ++ ++++g r + XP_022143421.1 14 LPPGCRFFPSDEQLLRSYLSNKTSATIfpnsphngA---SaacnLIKELDPFDYDPFDLPDfacfsyGSSGRKKHWYYYTATAFRENRGGRIRM- 104 79*******************9998555555441...055537***********44777654444778***9998877766655. PP NAM 78 tksgyWkatgkdkevlskkgelvglkktLvfykg.rapkgektdWvmheyrl 128 ksgyWk +g+ +ev+ ++g + g+k+++vfy g + ++++kt+W++ ey+l XP_022143421.1 105 -KSGYWKRKGRVREVIGHRGIVLGIKRSFVFYLGnSIKNAVKTNWIVYEYAL 155 .79*************************874678899*******87 PP

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence
MEDPQLFTAP SFSLPPGCRF FPSDEQLLRS YLSNKTSATI FPNSPHNGAS AACNLIKELD 60 PFDYDPFDLP DFACFSYGSS GRKKHWYYYT ATAFRENRGG RIRMKSGYWK RKGRVREVIG 120 HRGIVLGIKR SFVFYLGNSI KNAVKTNWIV YEYALGDHLK ASLVLHRVFL SSRGNSILEN 180 GLSSYGEGSV SEVCHNQRDG IGATNMVDAE ACEGDILNTV NGHTRYEMGL GQAMKPNCQV 240 ITDPDSATTT LQVPSEAYPC EMAYSCLTLN SRWDLNSSGK RHRLVIEPSL KWKRNSFMEL 300 ARLDGGADYQ LSGCKFAMGQ MFGIFLLMNM EMSVYSPKWD GGHECRWN

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence

MEDPQLFTAP SFSLPPGCRF FPSDEQLLRS YLSNKTSATI FPNSPHNGAS AACNLIKELD  60
PFDYDPFDLP DFACFSYGSS GRKKHWYYYT ATAFRENRGG RIRMKSGYWK RKGRVREVIG  120
HRGIVLGIKR SFVFYLGNSI KNAVKTNWIV YEYALGDHLK ASLVLHRVFL SSRGNSILEN  180
GLSSYGEGSV SEVCHNQRDG IGATNMVDAE ACEGDILNTV NGHTRYEMGL GQAMKPNCQV  240
ITDPDSATTT LQVPSEAYPC EMAYSCLTLN SRWDLNSSGK RHRLVIEPSL KWKRNSFMEL  300
ARLDGGADYQ LSGCKFAMGQ MFGIFLLMNM EMSVYSPKWD GGHECRWN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15500.1	3e-16	NAC family protein