PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022143280.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

G2-like

Protein Properties

Length: 401aa MW: 43915.8 Da PI: 8.216

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022143280.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103.4	1.4e-32	213	266	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt+ LH+rFv+ave+LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ XP_022143280.1 213 PRMRWTSSLHARFVHAVEHLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 266 9****************************************************7 PP
2	Myb_DNA-binding	46.7	7.1e-15	214	265	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++ ++v+av+ lGg+ t+k++ + m k +tl ++ks++q+y+ XP_022143280.1 214 RMRWTSSLHARFVHAVEHLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 265 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 401 aa Download sequence
MPLEGIFIEP SSTPLPDLSL QISPPNASSS SSNSSNSNSS SSIRNFDFFI QKNSQIFNSS 60 SAPQPAHTEL SLGRNNLLAA AAPPPNLRGV SAFDAASDGL RPIKGIPVYH NRPFPFLALD 120 HHQKILDHHH HHHHHHSSPC FYPMAAASNS YHPNLEAMAV LNSSSNNGSL PNLYRSAPST 180 RFNNGVGGAN SDGMMMRSRF LQKIPAKRSM RAPRMRWTSS LHARFVHAVE HLGGHERATP 240 KSVLELMDVK DLTLAHVKSH LQMYRTVKTT DKPAASSGQS DGSGEDDVSP TMGAGGGEHG 300 ARQFSDQRAP ADPGGQASPD LEFGSSTLWS NSSRDVWPQT NSNEMDVIRP TSSTQMQQKS 360 MHQIEECDSG AMKRYSSECK KPSLELEFRL GRAEWDVKER H

Sequence ? help Back to Top

Protein Sequence Length: 401 aa Download sequence

MPLEGIFIEP SSTPLPDLSL QISPPNASSS SSNSSNSNSS SSIRNFDFFI QKNSQIFNSS  60
SAPQPAHTEL SLGRNNLLAA AAPPPNLRGV SAFDAASDGL RPIKGIPVYH NRPFPFLALD  120
HHQKILDHHH HHHHHHSSPC FYPMAAASNS YHPNLEAMAV LNSSSNNGSL PNLYRSAPST  180
RFNNGVGGAN SDGMMMRSRF LQKIPAKRSM RAPRMRWTSS LHARFVHAVE HLGGHERATP  240
KSVLELMDVK DLTLAHVKSH LQMYRTVKTT DKPAASSGQS DGSGEDDVSP TMGAGGGEHG  300
ARQFSDQRAP ADPGGQASPD LEFGSSTLWS NSSRDVWPQT NSNEMDVIRP TSSTQMQQKS  360
MHQIEECDSG AMKRYSSECK KPSLELEFRL GRAEWDVKER H

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16560.1	2e-64	G2-like family protein