PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022142777.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family NAC
Protein Properties Length: 313aa    MW: 34067.2 Da    PI: 7.2827
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022142777.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM174.43.3e-54151421128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrFhPtdeel+ +yL kkv +++++   +i++vd++k+ePwdLp+k++ +ekewyfFs rd+ky+tg r+nrat++gyWkatgkd+e+ls+
  XP_022142777.1  15 LPPGFRFHPTDEELIAHYLLKKVLDSHFSS-PAIAQVDLNKSEPWDLPEKASMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREILSS 108
                     79*************************999.78***************999999***************************************98 PP

             NAM  96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      ++++  +kktLvfy+grapkg+kt+Wvmhe+rl
  XP_022142777.1 109 kTRSTLAMKKTLVFYTGRAPKGQKTNWVMHEFRL 142
                     566779**************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MDDSGGGHRR SDSYLPPGFR FHPTDEELIA HYLLKKVLDS HFSSPAIAQV DLNKSEPWDL  60
PEKASMGEKE WYFFSLRDRK YPTGLRTNRA TEAGYWKATG KDREILSSKT RSTLAMKKTL  120
VFYTGRAPKG QKTNWVMHEF RLAGKFAYHF LFAASSKDEW VISRVFKKSG SGAGAALCGG  180
AMKKSQLNPE PSSPSSVSLP PLLDSSPYPS AAFTERDGCS LDDPREHELH VTCFSTNNNL  240
AGAGFPSGGG LDFSTSGFPS LQSPFFSTVA PAPLQPLTHL LAGGTDFDGC GGGTAAEESR  300
PIGFADMADT WTF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53950.11e-89NAC family protein