PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022142672.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | NAC | ||||||||
Protein Properties | Length: 251aa MW: 28637.5 Da PI: 6.3018 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 135.1 | 4.6e-42 | 17 | 147 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 ppGfrF Pt+eel+++yL++++ g+ e ++v++ ++iy++ePwdLp+ +++++++w+f ++r++++a+g r++r+t++gyWkatg+ v XP_022142672.1 17 PPGFRFYPTEEELISFYLRHQLVGTIPEKHRVVPLLNIYDSEPWDLPNfageLCRGDSEQWFFLVPRQEREARGGRPSRTTAAGYWKATGSPVYV 111 9************************9999999***************646654455777************************************ PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +s+ ++++glkkt+vfy+grap+g+kt+W m+eyr+ XP_022142672.1 112 YSSCSKVIGLKKTMVFYRGRAPTGTKTKWKMNEYRA 147 **********************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence |
MAMAMAIGEK EAKEEYPPGF RFYPTEEELI SFYLRHQLVG TIPEKHRVVP LLNIYDSEPW 60 DLPNFAGELC RGDSEQWFFL VPRQEREARG GRPSRTTAAG YWKATGSPVY VYSSCSKVIG 120 LKKTMVFYRG RAPTGTKTKW KMNEYRAIDE EAKLRHEFSL CRVYVISGCF RAFDRRPMEA 180 TVGGPERRGK KTVQMARSPE TSCSVPGTAE ISGECAGSCS NLGMVEEDEE FEEALWEWDQ 240 IDFGPRIQKI N |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22380.1 | 3e-80 | NAC family protein |