PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022142529.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

NAC

Protein Properties

Length: 472aa MW: 53398.4 Da PI: 8.4571

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022142529.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	160	9.6e-50	131	257	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 + pGfrF+Ptdeel+++yLkkk+eg + ++ evi+ev+iyk+ePwdLp k+v ++++ew+fFs+r kky++g++++rat+ gyWkatgk+++v+s XP_022142529.1 131 MFPGFRFSPTDEELISFYLKKKLEGCEKSV-EVISEVEIYKYEPWDLPvKSVIQSDNEWFFFSPRGKKYPNGNQTRRATDLGYWKATGKERNVKS 224 579**********************999.99***********767777899********************************** PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128 +++++g+k+tLvf++grapkge+t+W+mhey+ XP_022142529.1 225 -GSNVIGTKRTLVFHTGRAPKGERTEWIMHEYNT 257 .99***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 472 aa Download sequence
MEYRHPADQP PWINPTLHRC CANRAIDFRS KSCPNVLDIY LLPQPPRVLP SQCLSNPPLS 60 CDQSNEFSRP FSFSPPQNKT HQQDTNSNSN SLISCFSHFP LLPLLPSCSV MAAAEKGISR 120 EVQLSMAVSS MFPGFRFSPT DEELISFYLK KKLEGCEKSV EVISEVEIYK YEPWDLPVKS 180 VIQSDNEWFF FSPRGKKYPN GNQTRRATDL GYWKATGKER NVKSGSNVIG TKRTLVFHTG 240 RAPKGERTEW IMHEYNTKDK AQDFLVVCRL RRNNEFRQHS CSNRASSSRM NLSSSLAHSG 300 EQVDSTSESN QKDAAEAAVV ESSGDQKDYG SDDFYTEILK DDIINLDEST PHADSNLYPL 360 VFRRSDIEKE SQHDAYGVLE WPPNQGSANR RIRLKKREVG RCGGKKLDVA KVGDSRYMVE 420 KARFGPIGRL MNTASSSSIV RGYVQVVIFV LLILLVMFVS RLEVFGMSIG LY

Sequence ? help Back to Top

Protein Sequence Length: 472 aa Download sequence

MEYRHPADQP PWINPTLHRC CANRAIDFRS KSCPNVLDIY LLPQPPRVLP SQCLSNPPLS  60
CDQSNEFSRP FSFSPPQNKT HQQDTNSNSN SLISCFSHFP LLPLLPSCSV MAAAEKGISR  120
EVQLSMAVSS MFPGFRFSPT DEELISFYLK KKLEGCEKSV EVISEVEIYK YEPWDLPVKS  180
VIQSDNEWFF FSPRGKKYPN GNQTRRATDL GYWKATGKER NVKSGSNVIG TKRTLVFHTG  240
RAPKGERTEW IMHEYNTKDK AQDFLVVCRL RRNNEFRQHS CSNRASSSRM NLSSSLAHSG  300
EQVDSTSESN QKDAAEAAVV ESSGDQKDYG SDDFYTEILK DDIINLDEST PHADSNLYPL  360
VFRRSDIEKE SQHDAYGVLE WPPNQGSANR RIRLKKREVG RCGGKKLDVA KVGDSRYMVE  420
KARFGPIGRL MNTASSSSIV RGYVQVVIFV LLILLVMFVS RLEVFGMSIG LY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	390	398	RRIRLKKRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27300.1	4e-77	NAC family protein