PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022142097.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family NAC
Protein Properties Length: 270aa    MW: 30129.8 Da    PI: 7.0853
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022142097.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM102.74.8e-32381791128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleev.ikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk......sgyWk 84 
                     +p+G++F+P+de+++ e+L++k++++ ++l +  i++++    i++++P++Lp  ++++ +  +fF++ +k+y+ g+rk+r+++      + +W+
  XP_022142097.1  38 VPAGVKFDPSDEQIL-EHLEAKLKRSLHPLIDQfIPTLEgehgICYTHPQNLP-GMREDGQIRHFFHRPSKAYTAGTRKRRKVQseeegiDTRWH 130
                     589**********99.99******9996665533655433344**********.666777778******************865566555667** PP

             NAM  85 atgkdkevlsk...kgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                     +tgk+++v+s     g+++g kk+Lv+y   gr++k++kt+W+mh+y+l
  XP_022142097.1 131 KTGKTRAVVSGgggVGAVMGFKKILVLYsnCGRERKAQKTNWIMHQYHL 179
                     **********85554556**********5547***************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MELSNYLRLR SRYSYDGDDA FGCGTLICRS CGHRSWDVPA GVKFDPSDEQ ILEHLEAKLK  60
RSLHPLIDQF IPTLEGEHGI CYTHPQNLPG MREDGQIRHF FHRPSKAYTA GTRKRRKVQS  120
EEEGIDTRWH KTGKTRAVVS GGGGVGAVMG FKKILVLYSN CGRERKAQKT NWIMHQYHLG  180
VTEDEKDGQL VASKVFFQKH PRQRQCPSSA AVDSPETAVF VDYSCSDNIP LFQFPLLGAA  240
GRREEDGEDI AEFGSVLLGD GDDNASSVVG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28470.14e-83NAC family protein