PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022141612.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MYB
Protein Properties Length: 292aa    MW: 33838 Da    PI: 8.5812
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022141612.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.65e-172065147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     rg W + Ede+l  +v+q+G  +W++Ia++++ gR++k+c++rw++ 
   XP_022141612.1 20 RGHWRPAEDEKLRLLVEQYGAQNWNSIAEKLQ-GRSGKSCRLRWFNQ 65
                     899*****************************.***********996 PP
2Myb_DNA-binding60.34.3e-1972115146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      r+++++eE+e+l+ a++ +G++ W++Iar ++ gRt++ +k++w+ 
   XP_022141612.1  72 RKPFSEEEEERLLAAHRIHGNK-WSLIARLFP-GRTDNAVKNHWHV 115
                      789*******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MIMKDCGDDG VNYEYKSCPR GHWRPAEDEK LRLLVEQYGA QNWNSIAEKL QGRSGKSCRL  60
RWFNQLDPRI IRKPFSEEEE ERLLAAHRIH GNKWSLIARL FPGRTDNAVK NHWHVIMARK  120
QREHSKQLCG NKRSYQEFSA NSSKFLGNQT DFAEELFRPS TSTTTTLLVS DNNGFLGLHN  180
HDEMVWNFKQ GSDSNIPILH RHYNNNYPNF RTPPTRFCLP NNKIPFGIYN LGSDNGVIKR  240
ELEKLCPAST AFVKFNMDDH GRRQEQPQDQ DESLKPDKDV PFIDFLGVGI SS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17950.12e-62MYB family protein