PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022140966.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family HSF
Protein Properties Length: 284aa    MW: 32207 Da    PI: 7.5054
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022140966.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind112.13.8e-35221122101
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl+k+y++++de+++++isw+++g++f+v+++  fa+++LpkyFkh+nf+SF+RQLn+YgF+kv +++          eF+++ F++g+k+ll++
  XP_022140966.1  22 FLTKTYQLVDDETIDHVISWNDDGSTFIVWNTMAFARDLLPKYFKHNNFTSFLRQLNTYGFRKVVSDR---------CEFANECFRRGEKQLLCE 107
                     9*****************************************************************99.........67**************** PP

                     XXXXX CS
    HSF_DNA-bind  97 ikrkk 101
                     i+r+k
  XP_022140966.1 108 IQRRK 112
                     ***98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MGEASGKATV GADSHRSVPT PFLTKTYQLV DDETIDHVIS WNDDGSTFIV WNTMAFARDL  60
LPKYFKHNNF TSFLRQLNTY GFRKVVSDRC EFANECFRRG EKQLLCEIQR RKLATPTAIP  120
TTQVLTLTGN YGEDQVISSN ATPARAIAEL IDENDRLRKE KVRLTEQLVE VKSLCNNIFS  180
LMSSFVENQF ESSFKVRESV LTSRTSLNLF PMKQSSGEDE KAERNPIGAP VGAKRPREHR  240
ERAAAAEGDT TSRLQSPDRS EVKSERSHCQ NNVDNQNTWL NQVH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62020.11e-66HSF family protein