PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022140615.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | MYB | ||||||||
Protein Properties | Length: 243aa MW: 27976.1 Da PI: 6.7173 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.4 | 2.5e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W+ eEd +l +v+++G+ W+ ++r g++R++k+c++rw++yl XP_022140615.1 14 RGAWSLEEDHKLTAYVEKYGPWKWRQVPRLAGLTRCGKSCRLRWLNYL 61 89******************88************************97 PP | |||||||
2 | Myb_DNA-binding | 55.4 | 1.4e-17 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ T eE +l+ ++++++G++ W+tIa++++ gRt++++k++w+ + XP_022140615.1 67 RGNYTNEENDLICKLHEKYGNR-WSTIAAKLP-GRTDNEVKNHWNAH 111 899*******************.*********.***********976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MVRAPVVDEN GLKRGAWSLE EDHKLTAYVE KYGPWKWRQV PRLAGLTRCG KSCRLRWLNY 60 LRPGIKRGNY TNEENDLICK LHEKYGNRWS TIAAKLPGRT DNEVKNHWNA HLKKQVNPKG 120 AAASSQPKPK QLTSSQIKLA KTEPSFFDYS SLEFGILESS SLSRQTFSSD DNFGIMNWAV 180 EDYDHSTGYG DFWSEPFIWD DRNNVGHVPD PDASWEFSSD YGIFSPHHET TYDDYVDLFC 240 SLL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G28110.1 | 7e-51 | MYB family protein |