PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022140363.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family HD-ZIP
Protein Properties Length: 843aa    MW: 92247.1 Da    PI: 6.0008
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022140363.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.22.9e-182683457
                    -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  4 RttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                      ++t+eq+e+Le++++++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  XP_022140363.1 26 YVRYTAEQVEALERVYAECPKPSSLRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 83
                    5789****************************************************97 PP
2START146.62.2e-461643722205
                     HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 
                     +aee+++e+++ka+ ++  Wv+++ +++g++++ +f+ s+++ g a+ra+g+v  ++    +e+l+d++ W +++++ e+      g  g+++l 
  XP_022140363.1 164 IAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCGGVAARACGLVSLEPS-KIAEILKDRPSWFRDCRSLEVFTMFPAGngGTIELV 257
                     7899******************************************************.7777777777***********999999999****** PP

                     EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHH CS
           START  95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslv 185
                     +++ +a+++l+p  df+++Ry+ +l+ g++v++++S++     p+    +++vRae+lpSg+li+p+++g+s +++v+h +l+++ ++++lr+l+
  XP_022140363.1 258 YTQVYAPTTLAPaCDFWTLRYTITLENGSLVVCERSLSGSGAGPSataAAQFVRAEMLPSGYLIRPCEGGGSIIHIVDHLNLEAWNVPEVLRPLY 352
                     **************************************999988889999********************************************* PP

                     HHHHHHHHHHHHHHTXXXXX CS
           START 186 ksglaegaktwvatlqrqce 205
                     +s+ + ++k++ a+l++ ++
  XP_022140363.1 353 ESSKVVAQKMTIAALRYVRQ 372
                     ***************98765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 843 aa     Download sequence    
MAMAIAHHRE SSSGSITRHL DSTGKYVRYT AEQVEALERV YAECPKPSSL RRQQLIRECP  60
ILSNIEPKQI KVWFQNRRCR EKQRKEASRL QTVNRKLNAM NKLLMEENDR LQKQVSQLVC  120
ENGYMRQQLQ TVPTATTDAS CDSVVTTPQT SRRDATNPAG LLSIAEETLA EFLSKATGTA  180
VDWVQMPGMK PGPDSVGIFA ISQSCGGVAA RACGLVSLEP SKIAEILKDR PSWFRDCRSL  240
EVFTMFPAGN GGTIELVYTQ VYAPTTLAPA CDFWTLRYTI TLENGSLVVC ERSLSGSGAG  300
PSATAAAQFV RAEMLPSGYL IRPCEGGGSI IHIVDHLNLE AWNVPEVLRP LYESSKVVAQ  360
KMTIAALRYV RQIAQETSGE VVYGLGRQPA VLRTFSQRLS RGFNDAVNGF NDNGWSLINC  420
DGAEDVVLAV NSTKNLGTTS NPANSLTYPG GVLCAKASML LQNVPPAVLV RFLREHRSEW  480
ADFNIDAYSA ATLKANSYAY PGMRPTRFTG SQIIMPLGHT IEHEELLEVI RLEGHPMVQE  540
DAFVSRDIHL LQICSGIDEN AVGACSELIF APIDEMFPDD APLLPSGFRI IPLDSKTNDA  600
KGTLTTQRTL DLTSSLEVGS GTSNSAGDVS SSHSPRSVLT IAFQFPFESS MQDNVANMAH  660
QYVRSVISSV QRVAMAISPS GCSPALGPKL SPGSPEALTL AHWICKSYSF QLGAELIRSD  720
SMESDSLLKN LWDHQDAILC CSLKSLPVFM FANQSGLDML ETTLVALQDI TLDKIFDESG  780
RKALCSDFPK LMQQGFAYLP GGICASTMGR HVSYEQAVAW KVLEADETTV HCLAFSFINW  840
SFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60690.10.0HD-ZIP family protein