PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022139809.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

HSF

Protein Properties

Length: 408aa MW: 46586.2 Da PI: 5.7719

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022139809.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	104.6	8.3e-33	16	107	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl k+y++++d+++++++sw+ +++sfvv ++ ef++ +Lpk+Fkhsnf+SF+RQLn+YgF+kv+ e+ weF+++ F +g+ l+++ XP_022139809.1 16 FLVKTYDMVDDPSTDSIVSWTPSNKSFVVRNPLEFSSVLLPKFFKHSNFSSFIRQLNTYGFRKVDPEQ---------WEFANEDFVRGQPYLMKN 101 9******************999************************************9998.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i+r+k XP_022139809.1 102 IHRRKP 107 *985 PP

Sequence ? help Back to Top
Protein Sequence Length: 408 aa Download sequence
MDEAQGGGGL SSLPPFLVKT YDMVDDPSTD SIVSWTPSNK SFVVRNPLEF SSVLLPKFFK 60 HSNFSSFIRQ LNTYGFRKVD PEQWEFANED FVRGQPYLMK NIHRRKPVHS HSLQNIHGQG 120 ISSPLTEVER KGLKGDIERL KQDKEQLLLE LRRHEQEHQG VGLQMQNLKD RFEHMQQQMQ 180 TFISLVVPGL RLDLLPRLET PERKRRLPRI AYNNNEDKLE DDQMGGTTQS VARENMDCSF 240 DPILKREQFE LFETSLIFWE GIIHSFGQKV SPLDSSSYLE LDESTSHASS PAMSHRQVSE 300 EFRCKSPGID MNLEPPVATV APESVASRDQ AAGVNAPVPT GVNDGFWEQF LTENPGSSDP 360 QEVQSARKDS NVVVEEKRQR DHGKFWWNVR SVNNVVEQIG HLTPAEKF

Sequence ? help Back to Top

Protein Sequence Length: 408 aa Download sequence

MDEAQGGGGL SSLPPFLVKT YDMVDDPSTD SIVSWTPSNK SFVVRNPLEF SSVLLPKFFK  60
HSNFSSFIRQ LNTYGFRKVD PEQWEFANED FVRGQPYLMK NIHRRKPVHS HSLQNIHGQG  120
ISSPLTEVER KGLKGDIERL KQDKEQLLLE LRRHEQEHQG VGLQMQNLKD RFEHMQQQMQ  180
TFISLVVPGL RLDLLPRLET PERKRRLPRI AYNNNEDKLE DDQMGGTTQS VARENMDCSF  240
DPILKREQFE LFETSLIFWE GIIHSFGQKV SPLDSSSYLE LDESTSHASS PAMSHRQVSE  300
EFRCKSPGID MNLEPPVATV APESVASRDQ AAGVNAPVPT GVNDGFWEQF LTENPGSSDP  360
QEVQSARKDS NVVVEEKRQR DHGKFWWNVR SVNNVVEQIG HLTPAEKF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	202	207	ERKRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18880.1	6e-93	HSF family protein