PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022139700.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | MYB | ||||||||
Protein Properties | Length: 244aa MW: 26608.2 Da PI: 9.1527 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 59.1 | 9.6e-19 | 47 | 92 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd +l ++v+++G+++W++I+r++ gR++k+c++rw + XP_022139700.1 47 KGPWSAEEDRILTRLVERYGPRNWSLISRYVK-GRSGKSCRLRWCNQ 92 79*****************************9.***********985 PP | |||||||
2 | Myb_DNA-binding | 53.9 | 4.1e-17 | 101 | 143 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++++ Ed+ ++ a++++G++ W+tIar ++ gRt++ +k++w++ XP_022139700.1 101 PFSPAEDDAIIAAHARYGNR-WATIARLLP-GRTDNAVKNHWNST 143 79******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence |
MNNYNNNNNN YNNSSSSPST SESSSSDSSL SGKPRPRATA GGPDKIKGPW SAEEDRILTR 60 LVERYGPRNW SLISRYVKGR SGKSCRLRWC NQLCPGVEHR PFSPAEDDAI IAAHARYGNR 120 WATIARLLPG RTDNAVKNHW NSTLKRRVRE QRRSAGEFAG GNDNADVVGG GSSASAPFGA 180 VDDDPLTALT LATPGIGSGS DVAPASDHRS ETLPAGFWEM MRDVIAREVR EYMTTTFSEN 240 SGFQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50060.1 | 3e-56 | MYB family protein |