PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022139653.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | MYB | ||||||||
Protein Properties | Length: 252aa MW: 28607.8 Da PI: 7.0091 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.6 | 4.5e-16 | 16 | 63 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd ll ++++ +G g+W+ a++ g++Rt+k+c++rw++yl XP_022139653.1 16 RGPWTIEEDTLLTHYIACHGEGHWNNLAKYAGLKRTGKSCRLRWLNYL 63 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 47.3 | 4.8e-15 | 69 | 112 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T++E++ +++++ ++G++ W++I++ ++ gRt++++k++w++ XP_022139653.1 69 RGNLTPQEQLVILELHSKWGNR-WSKISQQLP-GRTDNEIKNYWRT 112 7999******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence |
MAIRSCNNAT ESELRRGPWT IEEDTLLTHY IACHGEGHWN NLAKYAGLKR TGKSCRLRWL 60 NYLKPDIKRG NLTPQEQLVI LELHSKWGNR WSKISQQLPG RTDNEIKNYW RTRVQKQAKQ 120 LNIESNSQKF FETVRHLWIP RLLHKMDQTS SSSSSSSSSS SQSFFSAPVF QNYPSSSSSE 180 PAINEAAVSE TASTSDHGFG NSDVHTWQPP SGHFQLDPLS VLGAEFDAPV APPDWFLQDD 240 VAESFWNLEC LL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68320.1 | 8e-83 | MYB family protein |