PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022138816.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 122aa MW: 13856.3 Da PI: 7.605 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.7 | 7.7e-20 | 18 | 69 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 +y+GVr+++ +g+++AeIrd s + +r++lg+f taeeAa+a+++a+ ++g+ XP_022138816.1 18 RYRGVRRRP-WGKFAAEIRDSSR---HgARVWLGTFNTAEEAARAYDRAAYTMRGH 69 6********.**********432...25**************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 122 aa Download sequence |
MDEEPRSDGN NEGGGEVRYR GVRRRPWGKF AAEIRDSSRH GARVWLGTFN TAEEAARAYD 60 RAAYTMRGHL AVLNFPNEYP SHGGGSSSSA PAPRRQNQVI EFECLDNKVL EELLEYEEKR 120 KK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G04370.1 | 2e-20 | ERF family protein |