PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022138436.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | MYB | ||||||||
Protein Properties | Length: 274aa MW: 31361.9 Da PI: 5.0027 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48.5 | 1.9e-15 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd +l ++ +G +W++ ++ g+ R++k+c++rw +yl XP_022138436.1 14 RGPWSPEEDRILTTFIHNHGHSNWRALPKLAGLLRCGKSCRLRWTNYL 61 89******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 53.2 | 7.1e-17 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eE++ +++++++lG++ W++Ia++++ gRt++++k+ w+++l XP_022138436.1 67 RGNFTKEEEDTIINLHELLGNR-WSAIAAKLP-GRTDNEIKNVWHTHL 112 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 274 aa Download sequence |
MGRAPCCEKM GLKRGPWSPE EDRILTTFIH NHGHSNWRAL PKLAGLLRCG KSCRLRWTNY 60 LKPDIKRGNF TKEEEDTIIN LHELLGNRWS AIAAKLPGRT DNEIKNVWHT HLKKRLQKNT 120 KISPPKSQNK RKNQTKPQNS SHSSSIIIMS PSSQQSSSCE ISSVTDSYVT ENEYYSYEAE 180 EDAVALVEAL PLIDESFWSE VVIENEINEN ENNENGSNSN YYGEVQTEFP IMSMDHMVEL 240 NDDDKSNGQS LDDDMEFWYD VFIKAGGISE LPEF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23250.1 | 2e-81 | MYB family protein |