PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022138182.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MYB
Protein Properties Length: 316aa    MW: 36009.9 Da    PI: 4.6092
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022138182.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.62.2e-161461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +grWT+eEde+l ++++  G g+W++ ++  g+ R++k+c++rw +yl
   XP_022138182.1 14 KGRWTAEEDEILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYL 61
                     79******************************99************97 PP
2Myb_DNA-binding507e-1667112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg+ T e+++ +v++++ +G++ W++Ia +++ gRt++++k++w+++l
   XP_022138182.1  67 RGNITSEDEQMIVKLHNVFGNR-WSLIAGHLP-GRTDNEIKNYWNSHL 112
                      7999******************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MVRAPCCEKV GLKKGRWTAE EDEILTKYIQ ANGEGSWRSL PKNAGLLRCG KSCRLRWINY  60
LRTDLKRGNI TSEDEQMIVK LHNVFGNRWS LIAGHLPGRT DNEIKNYWNS HLSRKIYTVT  120
WPTSDKSSSA PSSVVTAILD IAPTTKRRRC TTDRKAGKTT IPTPDHMEKE EEEEEEEEGE  180
REVLRSELHK EEDDGKALLL GNNEVVLSPI MEHGENWGPY DWLDGEIMRL NNEILEWGVV  240
ESSGNLCSDQ TKVMTSSTDN EDHHQNGSCS SSMNSALENE QCLNWAWEDV GSVEEILDQW  300
ELQDISSWLW GGDRDS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49330.13e-73MYB family protein