PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022137548.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | MYB | ||||||||
Protein Properties | Length: 236aa MW: 27493.4 Da PI: 7.7068 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.9 | 1e-17 | 38 | 83 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ede+l ++v+++G ++W++Ia+++ gR++k+c++rw++ XP_022137548.1 38 RGHWRPAEDEKLRELVERHGAHNWNAIAQKVE-GRSGKSCRLRWFNQ 83 899*****************************.***********996 PP | |||||||
2 | Myb_DNA-binding | 51.3 | 2.7e-16 | 90 | 133 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++T++E+ +l+ ++ +G++ W+ Iar+++ gRt++ +k++w+ XP_022137548.1 90 RTPFTQDEERRLLASHRIHGNR-WAIIARHFP-GRTDNALKNHWHV 133 679*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence |
MRDENDGITY NKVCVFIYNY YCFAAAGSES ESERMCSRGH WRPAEDEKLR ELVERHGAHN 60 WNAIAQKVEG RSGKSCRLRW FNQLDPRINR TPFTQDEERR LLASHRIHGN RWAIIARHFP 120 GRTDNALKNH WHVIMARSKR KSKSTQNHHR LFNFPNIYYS SPNPTSSIPN PTPDTSNDHA 180 VVEFYDFLHL NADYITATRS EVIDNSRKDD EEVNQQAQAD DALPLPFIDF FSAQTS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G17950.1 | 1e-66 | MYB family protein |