PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022137454.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

bHLH

Protein Properties

Length: 340aa MW: 37714.8 Da PI: 8.2081

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022137454.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	29.9	1e-09	162	209	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ +L++l+P + +k Ka +L + ++Y++sLq XP_022137454.1 162 SHSLAERVRREKISERMKTLQRLVPGC----DKVTGKALMLDEIINYVQSLQ 209 8***********************9....555***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 340 aa Download sequence
MAAFSYQYQP FLLDSVFMPT NPLKMAAFLD DPNFNANCFS QFFPQEPPIH HFSPDLSKQS 60 PESSTLVEKS DSAEPPQLKA VTVTVTSPCS KKRKSRNNNS SASSTQSKGA TESTGKKQKM 120 AKGEDERKEG DQKPKTGKKE DKKISEEGYI HVRARRGQAT DSHSLAERVR REKISERMKT 180 LQRLVPGCDK VTGKALMLDE IINYVQSLQN QVEFLSMKLA SLNPIFFDFR MDLDGLMIQP 240 ETSLSSITPQ LPAMAQCSVV PPPALIDTTT PTTPSPAISA ASSYPLMDHS ANLFLLHQGM 300 SPNAYSQSQD NVKVSSWDVE DQKRKLLISS GIGDNLCYFH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	91	119	KKRKSRNNNSSASSTQSKGATESTGKKQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50915.2	3e-57	bHLH family protein