PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022137101.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | B3 | ||||||||
Protein Properties | Length: 555aa MW: 62919.2 Da PI: 6.2059 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 50.3 | 4.4e-16 | 31 | 119 | 1 | 97 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 ffkv+ d ++++ l++p fa++ + +k+++led+ g++W+v++ + + g+ ++kGW+ F +++ L+ gDfv+F ++ + +++v+ XP_022137101.1 31 FFKVM-FGDLFSQA-LYFPPMFAATVPML--ANKKVVLEDSLGQQWKVTV--SDCEGSLAFKKGWSAFSSEHSLEIGDFVIFNHIM--DLHFKVS 117 56666.44555555.********999544..3568***************..*******************************775..4544777 PP EE CS B3 96 vf 97 ++ XP_022137101.1 118 IY 119 76 PP | |||||||
2 | B3 | 38.1 | 2.7e-12 | 483 | 551 | 27 | 97 |
---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 27 ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 ++e+++ + l+d++ r W + + ++ vlt+GW+ F++ n+++ gD ++F+l+++ e+ + v+++ XP_022137101.1 483 RRNPEKKRLVFLRDPRKRLWPMLY--HEMPNVQVLTSGWEAFCSVNQIEPGDECLFHLEDEPERIYQVSIR 551 556778889***************..9*******************************9987777777776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 555 aa Download sequence |
MGSKVEACMD CTQRCLQLHR KANSLSSVTS FFKVMFGDLF SQALYFPPMF AATVPMLANK 60 KVVLEDSLGQ QWKVTVSDCE GSLAFKKGWS AFSSEHSLEI GDFVIFNHIM DLHFKVSIYT 120 KTGCEKVEFA KRGNMRKRTR STYPVLEKTN EGLKNPQASG TSVGSGSNVA LSQDKCNMTS 180 SQNVNVNRDK RPKYQSHDEC HKPLCKTEIF DDSYNFINQN KDVGLEENRS PLVDLFSMEI 240 PGTENATNKV AVDELNPNCA STLQKATIDV HPVVNAEVLP FPLNISANEI IEKSQCFEEA 300 DRNISGSDND SCHDKTIEVP FVTSATNSDR NMEHFCDTPL KDVVDCQNVP PIYCTPSTIT 360 RHDQEPHQKH TFPTDYSHSA KHEYTPISVE VQNFLHGDMP KIVKQEPLEI ITEVDKHEDL 420 IKQIWEPKFI KEEFLEKSNK IGRDGNDVTN NAIPAHISCI VAKDTPSFLE LPTSLQLSCS 480 RGRRNPEKKR LVFLRDPRKR LWPMLYHEMP NVQVLTSGWE AFCSVNQIEP GDECLFHLED 540 EPERIYQVSI RKCKN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 488 | 500 | KKRLVFLRDPRKR |
2 | 489 | 501 | KKRLVFLRDPRKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66980.1 | 5e-14 | B3 family protein |